RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, human

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG11-222	ENST00000560435	PPT2	Q9UMR5	302 aa		5.19	□□□□□ -1.58
SPG11-222	ENST00000560435	CYP1A1	P04798	512 aa	Predicted RBP	5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	EPHX1	P07099	455 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	KLF10	Q13118	480 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	MBLAC2	Q68D91	279 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	ZNF585A	Q6P3V2	769 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	ADAT2	Q7Z6V5	191 aa	Known RBP	5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	PALM2	Q8IXS6	379 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	IGDCC4	Q8TDY8	1250 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	DPF3	Q92784	378 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	FGD4	Q96M96	766 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	YTHDC1	Q96MU7	727 aa	Known RBP	5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	MMP19	Q99542	508 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	SEMA4A	Q9H3S1	761 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	DEF6	Q9H4E7	631 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	PHAX	Q9H814	394 aa	Known RBP	5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	TCAF1	Q9Y4C2	921 aa		5.18	□□□□□ -1.58
SPG11-222	ENST00000560435	PATE3	B3GLJ2	98 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	MUSK	O15146	869 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	THBD	P07204	575 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	PPP2CB	P62714	309 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	PPP2CA	P67775	309 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	CR1L	Q2VPA4	569 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	CLEC1B	Q9P126	229 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	TESMIN	Q9Y4I5	508 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	HS3ST3A1	Q9Y663	406 aa		5.17	□□□□□ -1.58
SPG11-222	ENST00000560435	STAT5A	P42229	794 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	NKX3-2	P78367	333 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	SLC7A5	Q01650	507 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	ARHGEF18	Q6ZSZ5	1173 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	MILR1	Q7Z6M3	343 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	RIOX2	Q8IUF8	465 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	TEX2	Q8IWB9	1127 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	COPS5	Q92905	334 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	WWC2-AS2	Q96NR7	200 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	TMEM168	Q9H0V1	697 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	BCL11A	Q9H165	835 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	L2HGDH	Q9H9P8	463 aa		5.16	□□□□□ -1.58
SPG11-222	ENST00000560435	C22orf46	C9J442	243 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	PLS3	P13797	630 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	IL13	P35225	146 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	SPDYA	Q5MJ70	313 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	MROH9	Q5TGP6	573 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	SLFN13	Q68D06	897 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	C19orf47	Q8N9M1	422 aa	Known RBP	5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	ING1	Q9UK53	422 aa	Predicted RBP	5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	SUGT1	Q9Y2Z0	365 aa		5.15	□□□□□ -1.59
SPG11-222	ENST00000560435	CYP7B1	O75881	506 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF326	Q5BKZ1	582 aa	Known RBP	5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	KBTBD2	Q8IY47	623 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435		Q8N1Y9	231 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	KLHL6	Q8WZ60	621 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	CLIC6	Q96NY7	704 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	YIPF4	Q9BSR8	244 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	JADE2	Q9NQC1	790 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	PCDHB10	Q9UN67	800 aa		5.14	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF623	O75123	536 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	MLLT6	P55198	1093 aa	Predicted RBP	5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	SCRN1	Q12765	414 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	COL9A2	Q14055	689 aa	Predicted RBP	5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	INF2	Q27J81	1249 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	LDLRAD1	Q5T700	205 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	KLHL36	Q8N4N3	616 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	TMEM87A	Q8NBN3	555 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	ZSWIM3	Q96MP5	696 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	WRNIP1	Q96S55	665 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	CRBN	Q96SW2	442 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	BCL2L13	Q9BXK5	485 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	MEGF9	Q9H1U4	602 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	GPRC5C	Q9NQ84	441 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	BTG4	Q9NY30	223 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	AKT3	Q9Y243	479 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF652	Q9Y2D9	606 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435		X6R8D5	127 aa		5.13	□□□□□ -1.59
SPG11-222	ENST00000560435		A0A1W2PQH9	124 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	FPR2	P25090	351 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF76	P36508	570 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	CCDC27	Q2M243	656 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	CCDC81	Q6ZN84	652 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	OR6P1	Q8NGX9	317 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435		Q8TCH9	128 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	GIPC2	Q8TF65	315 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	PTPN18	Q99952	460 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	DTL	Q9NZJ0	730 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	FTSJ1	Q9UET6	329 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	EMC9	Q9Y3B6	208 aa		5.12	□□□□□ -1.59
SPG11-222	ENST00000560435	ANKRD34B	A5PLL1	514 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	KCNH1	O95259	989 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	TGFB2	P61812	414 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	RPL11	P62913	178 aa	Known RBP	5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	PURA	Q00577	322 aa	Known RBP	5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	NFATC3	Q12968	1075 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF394	Q53GI3	561 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	POMZP3	Q6PJE2	187 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	TOE1	Q96GM8	510 aa	Known RBP	5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	TMEM209	Q96SK2	561 aa		5.11	□□□□□ -1.59
SPG11-222	ENST00000560435	ZNF341	Q9BYN7	854 aa		5.11	□□□□□ -1.59

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