RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 NSUN6Q8TEA1 469 aaKnown RBP17.05■□□□□ 0.32
IDH3A-219ENST00000560414 COPS5Q92905 334 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 LRCH3Q96II8 777 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 TMEM87BQ96K49 555 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
IDH3A-219ENST00000560414 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 DCDC2CA8MYV0 355 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 B4DLN1 442 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 ARVCFO00192 962 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 DDAH1O94760 285 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 ARIH2O95376 493 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 EIF2AK2P19525 551 aaKnown RBP17.04■□□□□ 0.32
IDH3A-219ENST00000560414 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
IDH3A-219ENST00000560414 HSD17B4P51659 736 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
IDH3A-219ENST00000560414 RNF20Q5VTR2 975 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
IDH3A-219ENST00000560414 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 TOX2Q96NM4 488 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 MAF1Q9H063 256 aa17.04■□□□□ 0.32
IDH3A-219ENST00000560414 KIAA0355O15063 1070 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 ZEB2O60315 1214 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 PLEKHA8P1O95397 391 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 LIFRP42702 1097 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 PSMC6P62333 389 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 PPP2R5BQ15173 497 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
IDH3A-219ENST00000560414 OR6J1Q8NGC5 347 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 PCDHGA4Q9Y5G9 962 aa17.03■□□□□ 0.32
IDH3A-219ENST00000560414 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
IDH3A-219ENST00000560414 RAG1P15918 1043 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 KIF5BP33176 963 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 GHRHRQ02643 423 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 SRBD1Q8N5C6 995 aaKnown RBP17.02■□□□□ 0.32
IDH3A-219ENST00000560414 IWS1Q96ST2 819 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
IDH3A-219ENST00000560414 LTBP2Q14767 1821 aa17.02■□□□□ 0.31
IDH3A-219ENST00000560414 CABYRO75952 493 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 NR3C2P08235 984 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 MYL3P08590 195 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 HOXB3P14651 431 aaPredicted RBP17.01■□□□□ 0.31
IDH3A-219ENST00000560414 ITGA7Q13683 1181 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 STXBP2Q15833 593 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 CCDC62Q6P9F0 684 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 FAM126BQ8IXS8 530 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
IDH3A-219ENST00000560414 MROH7Q68CQ1 1323 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
IDH3A-219ENST00000560414 POLR2MP0CAP2 368 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 MYCLP12524 364 aaPredicted RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 CPT1AP50416 773 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 TRAF1Q13077 416 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 SHHQ15465 462 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 LY6KQ17RY6 165 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 LRIT3Q3SXY7 679 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 SGMS1Q86VZ5 419 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 MICU3Q86XE3 530 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 SLC43A3Q8NBI5 491 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 IL31RAQ8NI17 732 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 PDCD2LQ9BRP1 358 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
IDH3A-219ENST00000560414 TBX21Q9UL17 535 aa17■□□□□ 0.31
IDH3A-219ENST00000560414 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 EIF3JO75822 258 aaKnown RBP16.99■□□□□ 0.31
IDH3A-219ENST00000560414 CALM1P0DP23 149 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 CALM2P0DP24 149 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 CALM3P0DP25 149 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 GNAQP50148 359 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 EPHB4P54760 987 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 PURAQ00577 322 aaKnown RBP16.99■□□□□ 0.31
IDH3A-219ENST00000560414 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
IDH3A-219ENST00000560414 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 PPP1R13LQ8WUF5 828 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
IDH3A-219ENST00000560414 LAMA2P24043 3122 aaKnown RBP16.99■□□□□ 0.31
IDH3A-219ENST00000560414 A6NJR5 290 aa16.98■□□□□ 0.31
IDH3A-219ENST00000560414 TLR3O15455 904 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms