RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 BRF1Q92994 677 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 A0A1W2PPC1 479 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 A6NJR5 290 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 GOLGA8AA7E2F4 631 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 MEIS2O14770 477 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 ZEB2O60315 1214 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 CASTP20810 708 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 CPT1AP50416 773 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 FGD1P98174 961 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 ITGA7Q13683 1181 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 TOX2Q96NM4 488 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 TBX21Q9UL17 535 aa13.44□□□□□ -0.26
RABGGTA-216ENST00000560243 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 FRMPD4Q14CM0 1322 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 SORBS3O60504 671 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 CABYRO75952 493 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 EPHB4P54760 987 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 MRPS9P82933 396 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 UBE2SQ16763 222 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 TDHQ8IZJ6 230 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 TRPV6Q9H1D0 765 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 BCAS3Q9H6U6 928 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 MRVI1Q9Y6F6 885 aa13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-216ENST00000560243 DOCK5Q9H7D0 1870 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 GH1P01241 217 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 CD4P01730 458 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 RAG1P15918 1043 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 CCND2P30279 289 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 SP2Q02086 613 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 C9orf50Q5SZB4 431 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 MTG1Q9BT17 334 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 PSTPIP2Q9H939 334 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
RABGGTA-216ENST00000560243 MROH7Q68CQ1 1323 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 EPB41L2O43491 1005 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 B4GALT4O60513 344 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 MMP3P08254 477 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 PSMA5P28066 241 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 SEMA3FQ13275 785 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 SHHQ15465 462 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 CUL5Q93034 780 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 PPP1R12CQ9BZL4 782 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
RABGGTA-216ENST00000560243 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 TIMP1P01033 207 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 UBA1P22314 1058 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 CYP2C18P33260 490 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 RCAN1P53805 252 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 KAT2BQ92831 832 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 INPP4AQ96PE3 977 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 TELO2Q9Y4R8 837 aa13.4□□□□□ -0.26
RABGGTA-216ENST00000560243 STXBP3O00186 592 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 KPNA6O60684 536 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 GGPS1O95749 300 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 CYP2C9P11712 490 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 PDIA3P30101 505 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 NAPAP54920 295 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 CCT2P78371 535 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 FPGSQ05932 587 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms