RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 ZEB2O60315 1214 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 PPP2R5BQ15173 497 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 FAM109BQ6ICB4 259 aaPredicted RBP10.5□□□□□ -0.73
IDH3A-217ENST00000559889 RMDN3Q96TC7 470 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 TM6SF1Q9BZW5 370 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 ERICH2A1L162 156 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 A6NJR5 290 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 B4GALT4O60513 344 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 LARGE1O95461 756 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 TXNP10599 105 aaKnown RBP10.5□□□□□ -0.73
IDH3A-217ENST00000559889 NCLP19338 710 aaKnown RBP10.5□□□□□ -0.73
IDH3A-217ENST00000559889 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 OR6J1Q8NGC5 347 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 PIGSQ96S52 555 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 MPHOSPH6Q99547 160 aaKnown RBP10.5□□□□□ -0.73
IDH3A-217ENST00000559889 TRPV6Q9H1D0 765 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
IDH3A-217ENST00000559889 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 CFBP00751 764 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 CSF2RAP15509 400 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 CPT1AP50416 773 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 SART3Q15020 963 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 KCNB2Q92953 911 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 PXMP2Q9NR77 195 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 VCANP13611 3396 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 UMODL1Q5DID0 1318 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 B4DLN1 442 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 TLR3O15455 904 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 PTMSP20962 102 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 MRPL12P52815 198 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 SKOR2Q2VWA4 1001 aaPredicted RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 HOMER1Q86YM7 354 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 RNPC3Q96LT9 517 aaKnown RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 MYL10Q9BUA6 226 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 SEZ6LQ9BYH1 1024 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 ALDH8A1Q9H2A2 487 aaPredicted RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
IDH3A-217ENST00000559889 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.49□□□□□ -0.73
IDH3A-217ENST00000559889 PRC1O43663 620 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 RGS20O76081 388 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 NR3C2P08235 984 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 HOXA13P31271 388 aaPredicted RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 CYP2C18P33260 490 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 SMAD3P84022 425 aaKnown RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 TTLL4Q14679 1199 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 STXBP2Q15833 593 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 LY6KQ17RY6 165 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 CLEC17AQ6ZS10 378 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 SEPT14Q6ZU15 432 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 CATIPQ7Z7H3 387 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 NECAB1Q8N987 351 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 MAP3K20Q9NYL2 800 aaKnown RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 CHD7Q9P2D1 2997 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 PNMA6FA0A0J9YX94 578 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 SH2B2O14492 632 aaPredicted RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 EIF3JO75822 258 aaKnown RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 MYL3P08590 195 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 FGD1P98174 961 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 ARHGAP1Q07960 439 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 MAP3K14Q99558 947 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 PDCD2LQ9BRP1 358 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 NOC4LQ9BVI4 516 aaKnown RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 HIPK3Q9H422 1215 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 TRMT13Q9NUP7 481 aaKnown RBP10.48□□□□□ -0.73
IDH3A-217ENST00000559889 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
IDH3A-217ENST00000559889 GOLGA6L3A6NEY3 463 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 BRD1O95696 1058 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 RPS6KB1P23443 525 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 MCM5P33992 734 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 STK3Q13188 491 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 KRT32Q14532 448 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 ME3Q16798 604 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 PPP1R13LQ8WUF5 828 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 NEK1Q96PY6 1258 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
IDH3A-217ENST00000559889 TPCN1Q9ULQ1 816 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 DDAH1O94760 285 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 ACRP10323 421 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms