RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 UBLCP1Q8WVY7 318 aaPredicted RBP7.31□□□□□ -1.24
ZEB1-217ENST00000559858 NAF1Q96HR8 494 aaKnown RBP7.31□□□□□ -1.24
ZEB1-217ENST00000559858 ARHGAP20Q9P2F6 1191 aa7.31□□□□□ -1.24
ZEB1-217ENST00000559858 RPS6KL1Q9Y6S9 549 aa7.31□□□□□ -1.24
ZEB1-217ENST00000559858 DPPA5A6NC42 116 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 EVI5O60447 810 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MYL6BP14649 208 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 XBP1P17861 261 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 KLK7P49862 253 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ZNF131P52739 623 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MRPS35P82673 323 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 LACTBP83111 547 aaPredicted RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ATP11AP98196 1134 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 PDIA5Q14554 519 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 KRT71Q3SY84 523 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 C1orf141Q5JVX7 400 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ERICH1Q86X53 443 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 C2CD5Q86YS7 1000 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 FAM114A1Q8IWE2 563 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 LMNTD2Q8IXW0 634 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 B4GALNT2Q8NHY0 566 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 TEKT4Q8WW24 435 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 TLCD1Q96CP7 247 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 IFT74Q96LB3 600 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MTRQ99707 1265 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 AFF2P51816 1311 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 NID2Q14112 1375 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 NEO1Q92859 1461 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 COQ9O75208 318 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 FLOT1O75955 427 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 VIMP08670 466 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MTIF2P46199 727 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 EIF3BP55884 814 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 NCALDP61601 193 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 KCNJ2P63252 427 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 LBRQ14739 615 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 AMOTQ4VCS5 1084 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 GIGYF2Q6Y7W6 1299 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ARHGAP22Q7Z5H3 698 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 USP38Q8NB14 1042 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 LPIN2Q92539 896 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MTMR8Q96EF0 704 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 NSRP1Q9H0G5 558 aaKnown RBP7.3□□□□□ -1.24
ZEB1-217ENST00000559858 ECT2Q9H8V3 914 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 SALL4Q9UJQ4 1053 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 FBXL5Q9UKA1 691 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 AGAP1Q9UPQ3 857 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 MYH13Q9UKX3 1938 aa7.3□□□□□ -1.24
ZEB1-217ENST00000559858 EYA2O00167 538 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 IGF2BP3O00425 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 SART1O43290 800 aaKnown RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 WFS1O76024 890 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ECHS1P30084 290 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 KRT2P35908 639 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 PMS1P54277 932 aaKnown RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 MAP3K12Q12852 859 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ZNF174Q15697 407 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 TTI2Q6NXR4 508 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 SPATA21Q7Z572 469 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 TRIM73Q86UV7 250 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 KLHL7Q8IXQ5 586 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 CSGALNACT2Q8N6G5 542 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ANKRD13CQ8N6S4 541 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 GBP7Q8N8V2 638 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 MDM1Q8TC05 714 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 DHTKD1Q96HY7 919 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ELAC2Q9BQ52 826 aaKnown RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 GORASP1Q9BQQ3 440 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 NOC4LQ9BVI4 516 aaKnown RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 RAB17Q9H0T7 212 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 LRRC42Q9Y546 428 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 PARP4Q9UKK3 1724 aaKnown RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 DISP2A7MBM2 1401 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 LMO7Q8WWI1 1683 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 GPR75-ASB3A0A0A6YYF3 556 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 FAM205CA6NFA0 338 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 DCDC2CA8MYV0 355 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 BHMG1C9JSJ3 638 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 BUB1O43683 1085 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 PPFIA2O75334 1257 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 RNF8O76064 485 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 UBOX5O94941 541 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 MMEP08473 750 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 RARAP10276 462 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ARID4AP29374 1257 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ALDH3A1P30838 453 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 CASP7P55210 303 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 FOXO4P98177 505 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 ATP2C1P98194 919 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-217ENST00000559858 RASSF7Q02833 373 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 PTGDRQ13258 359 aa7.29□□□□□ -1.24
ZEB1-217ENST00000559858 CUL3Q13618 768 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms