RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 KCTD13Q8WZ19 329 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 ALG3Q92685 438 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 OSBP2Q969R2 916 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 NBPF4Q96M43 638 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 X6R8D5 127 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 NCANO14594 1321 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 IQCA1LA6NCM1 817 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 CCDC85CA6NKD9 419 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 B8ZZF3 427 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 PRRG2O14669 202 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 U2SURPO15042 1029 aaKnown RBP6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 PDPK1O15530 556 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 SGSM2O43147 1006 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 PRODHO43272 600 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 MSCO60682 206 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 SASH1O94885 1247 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 FGFR1P11362 822 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 TARBP2Q15633 366 aaKnown RBP6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 NTRK3Q16288 839 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 FEZF2Q8TBJ5 459 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 ZNF669Q96BR6 464 aaPredicted RBP6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 ARMC5Q96C12 935 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 CCDC113Q9H0I3 377 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 NUDT5Q9UKK9 219 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 PCDHA2Q9Y5H9 948 aa6.46□□□□□ -1.38
CTDSPL2-207ENST00000559738 MYO1BO43795 1136 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 PABPC1P11940 636 aaKnown RBP6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 RASGRF1Q13972 1273 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 SLC9A5Q14940 896 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 RIOX2Q8IUF8 465 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 SP8Q8IXZ3 490 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 TMEM169Q96HH4 297 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 HIRIP3Q9BW71 556 aaPredicted RBP6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 SPATA9Q9BWV2 254 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 RNF38Q9H0F5 515 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 XYLT2Q9H1B5 865 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 CDIP1Q9H305 208 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 PFDN2Q9UHV9 154 aa6.45□□□□□ -1.38
CTDSPL2-207ENST00000559738 BLACEA4D250 179 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 OTOL1A6NHN0 477 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 ADCY3O60266 1144 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 DIAPH1O60610 1272 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 ZBTB7AO95365 584 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 NCAM1P13591 858 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 GTF2A2P52657 109 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 FOXO4P98177 505 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 LSAMPQ13449 338 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 MROH9Q5TGP6 573 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 NSMFQ6X4W1 530 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 USP53Q70EK8 1073 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 DCP2Q8IU60 420 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 LRRC47Q8N1G4 583 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 LINC01356Q8N9X3 169 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 SYT8Q8NBV8 401 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 RELTQ969Z4 430 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 TRMT2BQ96GJ1 504 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
CTDSPL2-207ENST00000559738 TRAV20A0A0B4J274 112 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 FAM221BA6H8Z2 402 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 H7BY64 318 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 SLC6A11P48066 632 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 RBM10P98175 930 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 RASA3Q14644 834 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 NFIXQ14938 502 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 KCNT2Q6UVM3 1135 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 TP53I13Q8NBR0 393 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 PHF20Q9BVI0 1012 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 LUC7LQ9NQ29 371 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 GPR27Q9NS67 375 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 CLDND1Q9NY35 253 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 RTEL1Q9NZ71 1219 aa6.43□□□□□ -1.38
CTDSPL2-207ENST00000559738 FFAR3O14843 346 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 BUD31P41223 144 aaPredicted RBP6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 B3GNT8Q7Z7M8 397 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 ZDHHC14Q8IZN3 488 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 CPA5Q8WXQ8 436 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 SEC14L1Q92503 715 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 SYT3Q9BQG1 590 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 AP5M1Q9H0R1 490 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 PPARGC1AQ9UBK2 798 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 PALD1Q9ULE6 856 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 PMF1-BGLAPU3KQ54 211 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 ADAMTS20P59510 1910 aa6.42□□□□□ -1.38
CTDSPL2-207ENST00000559738 HTRA3P83110 453 aa6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 CACNB2Q08289 660 aaPredicted RBP6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 VWA3BQ502W6 1294 aa6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 RSPO2Q6UXX9 243 aaPredicted RBP6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 SMARCC2Q8TAQ2 1214 aa6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 FNIP1Q8TF40 1166 aa6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 DCAF4Q8WV16 495 aa6.41□□□□□ -1.38
CTDSPL2-207ENST00000559738 DEPDC7Q96QD5 511 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms