RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 TICAM2Q86XR7 235 aa19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 SYTL5Q8TDW5 730 aaPredicted RBP19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 KAT2BQ92831 832 aa19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 MAF1Q9H063 256 aa19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 RNF41Q9H4P4 317 aaPredicted RBP19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 COL20A1Q9P218 1284 aa19.03■□□□□ 0.64
CDC42BPB-205ENST00000559245 ABCB11O95342 1321 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 DEFB103AP81534 67 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 CNKSR3Q6P9H4 555 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 DGKHQ86XP1 1220 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 NSUN6Q8TEA1 469 aaKnown RBP19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 DHX38Q92620 1227 aaKnown RBP19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 ESR2Q92731 530 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 ZBED2Q9BTP6 218 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 EPHX3Q9H6B9 360 aa19.02■□□□□ 0.64
CDC42BPB-205ENST00000559245 NEDD4P46934 1319 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 PARNO95453 639 aaKnown RBP19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 RBL2Q08999 1139 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 STXBP2Q15833 593 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 DGKDQ16760 1214 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 ADGRF4Q8IZF3 695 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 PNMA1Q8ND90 353 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 IWS1Q96ST2 819 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 RMDN3Q96TC7 470 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 HDAC6Q9UBN7 1215 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 GTF2IRD1Q9UHL9 959 aa19.01■□□□□ 0.63
CDC42BPB-205ENST00000559245 TRIM6-TRIM34B2RNG4 842 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 NBNO60934 754 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 CXCL10P02778 98 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 CKBP12277 381 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 MCF2L2Q86YR7 1114 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 GDPD5Q8WTR4 605 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 ALG1Q9BT22 464 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 LMCD1Q9NZU5 365 aa19■□□□□ 0.63
CDC42BPB-205ENST00000559245 DDX41Q9UJV9 622 aaKnown RBP19■□□□□ 0.63
CDC42BPB-205ENST00000559245 GJB5O95377 273 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 PSEN2P49810 448 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 TCTN1Q2MV58 587 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 ARHGEF16Q5VV41 709 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 C7orf31Q8N865 590 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 LRFN3Q9BTN0 628 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 KAT14Q9H8E8 782 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 NLRC5Q86WI3 1866 aa18.99■□□□□ 0.63
CDC42BPB-205ENST00000559245 ABHD14A-ACY1A0A1B0GW23 586 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 ZNF213O14771 459 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 KDM4AO75164 1064 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 EIF2AK2P19525 551 aaKnown RBP18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 QRICH1Q2TAL8 776 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 ASPRV1Q53RT3 343 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 IQCA1Q86XH1 822 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 RILPL2Q969X0 211 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 EMID1Q96A84 441 aaPredicted RBP18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 RAD9AQ99638 391 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 KATNAL1Q9BW62 490 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 MTUS1Q9ULD2 1270 aa18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 MRPL11Q9Y3B7 192 aaKnown RBP18.98■□□□□ 0.63
CDC42BPB-205ENST00000559245 DOCK5Q9H7D0 1870 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 DHX16O60231 1041 aaKnown RBP18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 EIF3JO75822 258 aaKnown RBP18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 F2P00734 622 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 ZNF286BP0CG31 522 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 NT5C2P49902 561 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 ERVK-21P61565 698 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 PTK7Q13308 1070 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 LAMC2Q13753 1193 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 IKBKEQ14164 716 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 MFSD10Q14728 455 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 KIAA0753Q2KHM9 967 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 FBXO11Q86XK2 927 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 ANKS1AQ92625 1134 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 TGS1Q96RS0 853 aaKnown RBP18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 SUGCTQ9HAC7 445 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 MRVI1Q9Y6F6 885 aa18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 BAZ2BQ9UIF8 2168 aaKnown RBP18.97■□□□□ 0.63
CDC42BPB-205ENST00000559245 LINC01553A4QN01 128 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 HAS3O00219 553 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 EFCAB14O75071 495 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 NR3C2P08235 984 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 HDAC1Q13547 482 aaPredicted RBP18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 TRIM71Q2Q1W2 868 aaKnown RBP18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 TMEM31Q5JXX7 168 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 ZNF618Q5T7W0 954 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 ZSCAN10Q96SZ4 725 aaPredicted RBP18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 JMJD4Q9H9V9 463 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 PXMP2Q9NR77 195 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 KAT6AQ92794 2004 aa18.96■□□□□ 0.63
CDC42BPB-205ENST00000559245 B4E1Z4 1266 aa18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 RBAK-RBAKDNI3L0D1 243 aa18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 CFBP00751 764 aa18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 SDSP20132 328 aa18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 RRP1P56182 461 aaKnown RBP18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 ZNF200P98182 395 aaPredicted RBP18.95■□□□□ 0.62
CDC42BPB-205ENST00000559245 TRAF7Q6Q0C0 670 aa18.95■□□□□ 0.62
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