RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
SHF-204ENST00000558685 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHF-204ENST00000558685 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
SHF-204ENST00000558685 TTLL4Q14679 1199 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 NTRK3Q16288 839 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 PSTPIP2Q9H939 334 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
SHF-204ENST00000558685 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
SHF-204ENST00000558685 STXBP3O00186 592 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 ARVCFO00192 962 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 NKRFO15226 690 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHF-204ENST00000558685 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
SHF-204ENST00000558685 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 PSMC6P62333 389 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
SHF-204ENST00000558685 SP2Q02086 613 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 ARHGAP1Q07960 439 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 PKN1Q16512 942 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 UBE2SQ16763 222 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 BCAS3Q9H6U6 928 aa13.53□□□□□ -0.24
SHF-204ENST00000558685 NCOA5Q9HCD5 579 aaKnown RBP13.53□□□□□ -0.24
SHF-204ENST00000558685 KIAA1217Q5T5P2 1943 aa13.52□□□□□ -0.24
SHF-204ENST00000558685 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
SHF-204ENST00000558685 CCND2P30279 289 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 BMP8BP34820 402 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
SHF-204ENST00000558685 MDM2Q00987 491 aaPredicted RBP13.52□□□□□ -0.25
SHF-204ENST00000558685 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 FAM126BQ8IXS8 530 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
SHF-204ENST00000558685 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
SHF-204ENST00000558685 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 KIAA0355O15063 1070 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 CABYRO75952 493 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 GH1P01241 217 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 CD4P01730 458 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 CLTBP09497 229 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 ANAPC15P60006 121 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
SHF-204ENST00000558685 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 PPP1R13LQ8WUF5 828 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 CUL5Q93034 780 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 PHKBQ93100 1093 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 EMID1Q96A84 441 aaPredicted RBP13.51□□□□□ -0.25
SHF-204ENST00000558685 PRDM5Q9NQX1 630 aaPredicted RBP13.51□□□□□ -0.25
SHF-204ENST00000558685 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 RTEL1Q9NZ71 1219 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
SHF-204ENST00000558685 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 PRPF3O43395 683 aaKnown RBP13.5□□□□□ -0.25
SHF-204ENST00000558685 ZEB2O60315 1214 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 SORBS3O60504 671 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 MMP3P08254 477 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 MYL3P08590 195 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 UBA1P22314 1058 aaKnown RBP13.5□□□□□ -0.25
SHF-204ENST00000558685 CPT1AP50416 773 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
SHF-204ENST00000558685 NAPAP54920 295 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 PCNX4Q63HM2 1172 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 KAT2BQ92831 832 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 BADQ92934 168 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
SHF-204ENST00000558685 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 TELO2Q9Y4R8 837 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
SHF-204ENST00000558685 SCN10AQ9Y5Y9 1956 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 LTBP2Q14767 1821 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 DCDC2CA8MYV0 355 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 TGFB3P10600 412 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 HOXD8P13378 290 aaPredicted RBP13.49□□□□□ -0.25
SHF-204ENST00000558685 SCG2P13521 617 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 IFNAR1P17181 557 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 ITGB5P18084 799 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 ICAM3P32942 547 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
SHF-204ENST00000558685 CELF3Q5SZQ8 465 aaKnown RBP13.49□□□□□ -0.25
SHF-204ENST00000558685 PPP1R18Q6NYC8 613 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
SHF-204ENST00000558685 TRPV6Q9H1D0 765 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 ALDH8A1Q9H2A2 487 aaPredicted RBP13.49□□□□□ -0.25
SHF-204ENST00000558685 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
SHF-204ENST00000558685 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms