RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ANO1Q5XXA6 986 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 PCNX4Q63HM2 1172 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 MCTP2Q6DN12 878 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 TAPT1Q6NXT6 567 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 VSIG10LQ86VR7 867 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 INTS4Q96HW7 963 aaKnown RBP19.94■□□□□ 0.78
TPM1-214ENST00000558544 BRMS1Q9HCU9 246 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 PAK6Q9NQU5 681 aaPredicted RBP19.94■□□□□ 0.78
TPM1-214ENST00000558544 KIAA0100Q14667 2235 aaKnown RBP19.93■□□□□ 0.78
TPM1-214ENST00000558544 SEPT4O43236 478 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 AKR1A1P14550 325 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 SREBF1P36956 1147 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 ADCYAP1R1P41586 468 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 CCDC144BQ3MJ40 725 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 SEPT14Q6ZU15 432 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 FBXO18Q8NFZ0 1043 aa19.93■□□□□ 0.78
TPM1-214ENST00000558544 LENG1Q96BZ8 264 aaPredicted RBP19.93■□□□□ 0.78
TPM1-214ENST00000558544 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.92■□□□□ 0.78
TPM1-214ENST00000558544 ADCY6O43306 1168 aa19.92■□□□□ 0.78
TPM1-214ENST00000558544 EIF3JO75822 258 aaKnown RBP19.92■□□□□ 0.78
TPM1-214ENST00000558544 NR5A1Q13285 461 aa19.92■□□□□ 0.78
TPM1-214ENST00000558544 DIS3L2Q8IYB7 885 aaKnown RBP19.92■□□□□ 0.78
TPM1-214ENST00000558544 DEFB118Q96PH6 123 aa19.92■□□□□ 0.78
TPM1-214ENST00000558544 RTEL1Q9NZ71 1219 aa19.92■□□□□ 0.78
TPM1-214ENST00000558544 DDX20Q9UHI6 824 aaKnown RBP19.92■□□□□ 0.78
TPM1-214ENST00000558544 FAM184BQ9ULE4 1060 aa19.92■□□□□ 0.78
TPM1-214ENST00000558544 BTBD18B2RXH4 712 aa19.91■□□□□ 0.78
TPM1-214ENST00000558544 RGS20O76081 388 aa19.91■□□□□ 0.78
TPM1-214ENST00000558544 HSP90AA1P07900 732 aaKnown RBP19.91■□□□□ 0.78
TPM1-214ENST00000558544 ARHGAP4P98171 946 aa19.91■□□□□ 0.78
TPM1-214ENST00000558544 SAFBQ15424 915 aaKnown RBP eCLIP19.91■□□□□ 0.78
TPM1-214ENST00000558544 KRT25Q7Z3Z0 450 aa19.91■□□□□ 0.78
TPM1-214ENST00000558544 TMEM106CQ9BVX2 250 aa19.91■□□□□ 0.78
TPM1-214ENST00000558544 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 RBM47A0AV96 593 aaKnown RBP19.9■□□□□ 0.78
TPM1-214ENST00000558544 STAM2O75886 525 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 TMEM63BQ5T3F8 832 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 XRRA1Q6P2D8 792 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 TBCKQ8TEA7 893 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 SCFD2Q8WU76 684 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 CRYGNQ8WXF5 182 aa19.9■□□□□ 0.78
TPM1-214ENST00000558544 CCDC85CA6NKD9 419 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 MSCO60682 206 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 ARIH2O95376 493 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 GJB1P08034 283 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 SMPD1P17405 629 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 PTGS1P23219 599 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 TNFAIP2Q03169 654 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 NONOQ15233 471 aaKnown RBP eCLIP19.89■□□□□ 0.77
TPM1-214ENST00000558544 GNPTABQ3T906 1256 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 EARS2Q5JPH6 523 aaKnown RBP19.89■□□□□ 0.77
TPM1-214ENST00000558544 LARP1BQ659C4 914 aaKnown RBP19.89■□□□□ 0.77
TPM1-214ENST00000558544 PIK3AP1Q6ZUJ8 805 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 TNFRSF25Q93038 417 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 INPP4AQ96PE3 977 aaPredicted RBP19.89■□□□□ 0.77
TPM1-214ENST00000558544 WDR11Q9BZH6 1224 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 MRVI1Q9Y6F6 885 aa19.89■□□□□ 0.77
TPM1-214ENST00000558544 FAM205CA6NFA0 338 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 H3BQV1 296 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 RARBP10826 455 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 ZNF76P36508 570 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 BECN1Q14457 450 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 TTLL4Q14679 1199 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 INF2Q27J81 1249 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 GJC2Q5T442 439 aaPredicted RBP19.88■□□□□ 0.77
TPM1-214ENST00000558544 IFFO2Q5TF58 517 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 LHX8Q68G74 356 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 IQSEC1Q6DN90 963 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 U2AF1L4Q8WU68 220 aaKnown RBP19.88■□□□□ 0.77
TPM1-214ENST00000558544 UBIAD1Q9Y5Z9 338 aa19.88■□□□□ 0.77
TPM1-214ENST00000558544 POTEFA5A3E0 1075 aa19.87■□□□□ 0.77
TPM1-214ENST00000558544 CYP3A4P08684 503 aa19.87■□□□□ 0.77
TPM1-214ENST00000558544 TXNP10599 105 aaKnown RBP19.87■□□□□ 0.77
TPM1-214ENST00000558544 ITGB5P18084 799 aa19.87■□□□□ 0.77
TPM1-214ENST00000558544 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
TPM1-214ENST00000558544 CYP2W1Q8TAV3 490 aa19.87■□□□□ 0.77
TPM1-214ENST00000558544 MXRA8Q9BRK3 442 aa19.87■□□□□ 0.77
TPM1-214ENST00000558544 KIF28PB7ZC32 967 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 EDIL3O43854 480 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 DUSP11O75319 330 aaKnown RBP19.86■□□□□ 0.77
TPM1-214ENST00000558544 SGPL1O95470 568 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 GJA8P48165 433 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 SEMA3FQ13275 785 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 LY6KQ17RY6 165 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 DUSP28Q4G0W2 176 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 CEP55Q53EZ4 464 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 CCDC62Q6P9F0 684 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 NLRX1Q86UT6 975 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 COPS5Q92905 334 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 XPNPEP3Q9NQH7 507 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 SYNRGQ9UMZ2 1314 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 GNEQ9Y223 722 aaKnown RBP19.86■□□□□ 0.77
TPM1-214ENST00000558544 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
TPM1-214ENST00000558544 FAM86B1E9PN63 330 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 FIBPO43427 364 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 FAM86B2P0C5J1 330 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 ICAM3P32942 547 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 SOX10P56693 466 aa19.85■□□□□ 0.77
TPM1-214ENST00000558544 MTMR1Q13613 665 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms