RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 RRP36Q96EU6 259 aaKnown RBP13.79□□□□□ -0.2
HERC1-202ENST00000558324 TCEANC2Q96MN5 208 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 GUCD1Q96NT3 240 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 SPZ1Q9BXG8 430 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
HERC1-202ENST00000558324 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
HERC1-202ENST00000558324 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
HERC1-202ENST00000558324 CCND2P30279 289 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
HERC1-202ENST00000558324 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
HERC1-202ENST00000558324 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 SCLYQ96I15 445 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
HERC1-202ENST00000558324 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
HERC1-202ENST00000558324 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 RGS20O76081 388 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 ZNF286BP0CG31 522 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 CALM1P0DP23 149 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 CALM2P0DP24 149 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 CALM3P0DP25 149 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 LIFRP42702 1097 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 GNAQP50148 359 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 DHX37Q8IY37 1157 aaKnown RBP13.77□□□□□ -0.21
HERC1-202ENST00000558324 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
HERC1-202ENST00000558324 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.219e-6■■□□□ 14.5
HERC1-202ENST00000558324 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 NOD1Q9Y239 953 aa13.77□□□□□ -0.21
HERC1-202ENST00000558324 GRXCR1A8MXD5 290 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 GGPS1O95749 300 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 CASTP20810 708 aaKnown RBP13.76□□□□□ -0.21
HERC1-202ENST00000558324 DGKDQ16760 1214 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 SMARCC2Q8TAQ2 1214 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
HERC1-202ENST00000558324 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
HERC1-202ENST00000558324 BAZ2BQ9UIF8 2168 aaKnown RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 FGBP02675 491 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 DNAJB2P25686 324 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 DEFB128Q7Z7B8 93 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 PPTC7Q8NI37 304 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 KAT2BQ92831 832 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 CUL5Q93034 780 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
HERC1-202ENST00000558324 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
HERC1-202ENST00000558324 SCN10AQ9Y5Y9 1956 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 LAMA2P24043 3122 aaKnown RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 NEFLP07196 543 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 PBX2P40425 430 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 MRPS9P82933 396 aaKnown RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 SP2Q02086 613 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 PTGISQ16647 500 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 CELF3Q5SZQ8 465 aaKnown RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 GDF6Q6KF10 455 aaPredicted RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 HERVK_113Q902F9 699 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 SPATA33Q96N06 139 aa13.74□□□□□ -0.21
HERC1-202ENST00000558324 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
HERC1-202ENST00000558324 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 F2P00734 622 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 CPA1P15085 419 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 PSEN2P49810 448 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms