RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 CCL23P55773 120 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 LAMC2Q13753 1193 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 COL9A3Q14050 684 aaPredicted RBP14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 PGM5Q15124 567 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 VSIG10LQ86VR7 867 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 PPP1R13LQ8WUF5 828 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 CUL5Q93034 780 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-202ENST00000558321 ACRP10323 421 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 CYP2C9P11712 490 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 KRT32Q14532 448 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 DGKDQ16760 1214 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 FAM109BQ6ICB4 259 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 MICU3Q86XE3 530 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 SMARCC2Q8TAQ2 1214 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 NOC4LQ9BVI4 516 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
CDC42BPB-202ENST00000558321 MYH6P13533 1939 aa14.27□□□□□ -0.12
CDC42BPB-202ENST00000558321 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 SORBS3O60504 671 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 MMP3P08254 477 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 FGD1P98174 961 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 TMEM240Q5SV17 173 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 IL31RAQ8NI17 732 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 TCEANC2Q96MN5 208 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 IL23AQ9NPF7 189 aa14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 NAP1L2Q9ULW6 460 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-202ENST00000558321 UMODL1Q5DID0 1318 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 FGBP02675 491 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 TGFB3P10600 412 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 PTPN11Q06124 597 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 TSGA10IPQ3SY00 556 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 GNPTABQ3T906 1256 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 RETREG2Q8NC44 543 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 EMID1Q96A84 441 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 MLXIPQ9HAP2 919 aa14.26□□□□□ -0.13
CDC42BPB-202ENST00000558321 ZBTB43O43298 467 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 RGS20O76081 388 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 GGPS1O95749 300 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 EXOSC10Q01780 885 aaKnown RBP14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 SCLYQ96I15 445 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 ALG1Q9BT22 464 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 STXBP5LQ9Y2K9 1186 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
CDC42BPB-202ENST00000558321 BAZ2BQ9UIF8 2168 aaKnown RBP14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 PPFIA4O75335 1185 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 STAM2O75886 525 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 REC8O95072 547 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 PSEN2P49810 448 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 SP2Q02086 613 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 PTGISQ16647 500 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 RTN1Q16799 776 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 OTOP2Q7RTS6 562 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 HEATR3Q7Z4Q2 680 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 WNT8AQ9H1J5 351 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 SEMA6BQ9H3T3 888 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 BRPF3Q9ULD4 1205 aa14.24□□□□□ -0.13
CDC42BPB-202ENST00000558321 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 MEIS2O14770 477 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms