RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PTGISQ16647 500 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 NFRKBQ6P4R8 1299 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 CCDC62Q6P9F0 684 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
TPM1-211ENST00000558314 USP38Q8NB14 1042 aa18.04■□□□□ 0.48
TPM1-211ENST00000558314 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
TPM1-211ENST00000558314 EIF3JO75822 258 aaKnown RBP18.03■□□□□ 0.48
TPM1-211ENST00000558314 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
TPM1-211ENST00000558314 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
TPM1-211ENST00000558314 GRM4Q14833 912 aa18.03■□□□□ 0.48
TPM1-211ENST00000558314 CATIPQ7Z7H3 387 aa18.03■□□□□ 0.48
TPM1-211ENST00000558314 MICALL1Q8N3F8 863 aa18.03■□□□□ 0.48
TPM1-211ENST00000558314 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
TPM1-211ENST00000558314 OPLAHO14841 1288 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 SGSM2O43147 1006 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 ACTN1P12814 892 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 BFSP2Q13515 415 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 DGKDQ16760 1214 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 PPP2R2DQ66LE6 453 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 C7orf31Q8N865 590 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
TPM1-211ENST00000558314 DDX41Q9UJV9 622 aaKnown RBP18.02■□□□□ 0.48
TPM1-211ENST00000558314 PFKMP08237 780 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 IQCF3P0C7M6 154 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 PSEN2P49810 448 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 HSD17B4P51659 736 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 PTPN11Q06124 597 aaPredicted RBP18.01■□□□□ 0.47
TPM1-211ENST00000558314 SLC35G1Q2M3R5 365 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 GDF6Q6KF10 455 aaPredicted RBP18.01■□□□□ 0.47
TPM1-211ENST00000558314 NFXL1Q6ZNB6 911 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 IL31RAQ8NI17 732 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 PDCD2LQ9BRP1 358 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 MAF1Q9H063 256 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 PRDM6Q9NQX0 595 aa18.01■□□□□ 0.47
TPM1-211ENST00000558314 RBM8AQ9Y5S9 174 aaKnown RBP18.01■□□□□ 0.47
TPM1-211ENST00000558314 A0A0C4DFX4 3053 aa18■□□□□ 0.47
TPM1-211ENST00000558314 CUL9Q8IWT3 2517 aa18■□□□□ 0.47
TPM1-211ENST00000558314 LAMC2Q13753 1193 aa18■□□□□ 0.47
TPM1-211ENST00000558314 PGM5Q15124 567 aa18■□□□□ 0.47
TPM1-211ENST00000558314 CASC1Q6TDU7 716 aa18■□□□□ 0.47
TPM1-211ENST00000558314 KAT2BQ92831 832 aa18■□□□□ 0.47
TPM1-211ENST00000558314 MTMR8Q96EF0 704 aa18■□□□□ 0.47
TPM1-211ENST00000558314 SPATA33Q96N06 139 aa18■□□□□ 0.47
TPM1-211ENST00000558314 CERS4Q9HA82 394 aa18■□□□□ 0.47
TPM1-211ENST00000558314 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
TPM1-211ENST00000558314 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 PNMA6FA0A0J9YX94 578 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 RBAK-RBAKDNI3L0D1 243 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 GGPS1O95749 300 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 CCND2P30279 289 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 RFC2P35250 354 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 ANTXR2P58335 489 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 TRAF1Q13077 416 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 ADGRE1Q14246 886 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 MFSD10Q14728 455 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
TPM1-211ENST00000558314 VWCEQ96DN2 955 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 CDH23Q9H251 3354 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 SCN5AQ14524 2016 aa17.99■□□□□ 0.47
TPM1-211ENST00000558314 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 CYTH3O43739 400 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 TROAPQ12815 778 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
TPM1-211ENST00000558314 KATNAL1Q9BW62 490 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 MLXIPQ9HAP2 919 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 PCDHA11Q9Y5I1 949 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 MYO9BQ13459 2157 aa17.98■□□□□ 0.47
TPM1-211ENST00000558314 BAZ2BQ9UIF8 2168 aaKnown RBP17.98■□□□□ 0.47
TPM1-211ENST00000558314 PRC1O43663 620 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 RGS20O76081 388 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 CA3P07451 260 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 KCNJ6P48051 423 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 ZNF200P98182 395 aaPredicted RBP17.97■□□□□ 0.47
TPM1-211ENST00000558314 VSIG10LQ86VR7 867 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
TPM1-211ENST00000558314 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 GTF2IRD1Q9UHL9 959 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
TPM1-211ENST00000558314 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 RFXAPO00287 272 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 SELPP16109 830 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 RXRAP19793 462 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 UBA1P22314 1058 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 SP2Q02086 613 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 SP4Q02446 784 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 CELF3Q5SZQ8 465 aaKnown RBP17.96■□□□□ 0.47
TPM1-211ENST00000558314 LRRC8DQ7L1W4 858 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
TPM1-211ENST00000558314 CAGE1Q8TC20 777 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms