RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 RAD21O60216 631 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 SNAI1O95863 264 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 FCGRTP55899 365 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 SHC4Q6S5L8 630 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 B3GNT9Q6UX72 402 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 ZNF396Q96N95 335 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 NR1I2O75469 434 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 RNF207Q6ZRF8 634 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 SIP14410 1827 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 UBE2SQ16763 222 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
RORA-207ENST00000558234 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
RORA-207ENST00000558234 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 IWS1Q96ST2 819 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 FCER1AP12319 257 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 PSMC4P43686 418 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 PRKCZQ05513 592 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
RORA-207ENST00000558234 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
RORA-207ENST00000558234 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 ICAM3P32942 547 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 KRT2P35908 639 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 FOSBP53539 338 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 NAPAP54920 295 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 GRM1Q13255 1194 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 TRIB2Q92519 343 aa13.09□□□□□ -0.31
RORA-207ENST00000558234 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.31
RORA-207ENST00000558234 RILPL1Q5EBL4 403 aa13.08□□□□□ -0.31
RORA-207ENST00000558234 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.31
RORA-207ENST00000558234 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.31
RORA-207ENST00000558234 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
RORA-207ENST00000558234 ADCY6O43306 1168 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
RORA-207ENST00000558234 CYBAP13498 195 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 CALML3P27482 149 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 PTPN22Q9Y2R2 807 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 PGK2P07205 417 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 GRIN1Q05586 938 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
RORA-207ENST00000558234 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 NCAPG2Q86XI2 1143 aa13.08□□□□□ -0.32
RORA-207ENST00000558234 CMA1P23946 247 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 Q4G0T1 1027 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 CLSTN2Q9H4D0 955 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 GNA11P29992 359 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 CCL14Q16627 93 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 PPP4R3AQ6IN85 833 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 SPTLC2O15270 562 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 CTAGE5O15320 804 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 STAM2O75886 525 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 ITGB5P18084 799 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
RORA-207ENST00000558234 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
RORA-207ENST00000558234 RGS2P41220 211 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
RORA-207ENST00000558234 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
RORA-207ENST00000558234 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
RORA-207ENST00000558234 RASGRP4Q8TDF6 673 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 FAM86B1E9PN63 330 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 USP11P51784 963 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms