RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MAP3K20Q9NYL2 800 aaKnown RBP10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 MYO9BQ13459 2157 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 CCDC69A6NI79 296 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 DCDC2CA8MYV0 355 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 NKRFO15226 690 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 ZEB2O60315 1214 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 CABYRO75952 493 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 NR3C2P08235 984 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 TXNP10599 105 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 EIF2AK2P19525 551 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 RXRAP19793 462 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 HOXA13P31271 388 aaPredicted RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 GNAQP50148 359 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 TRAF1Q13077 416 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 STXBP2Q15833 593 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 ARHGEF16Q5VV41 709 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 OR6J1Q8NGC5 347 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 CTCFLQ8NI51 663 aaPredicted RBP10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 LZTS2Q9BRK4 669 aa10.17□□□□□ -0.78
SNRPA1-206ENST00000558059 MROH7Q68CQ1 1323 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 TRIP12Q14669 1992 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 A6NJR5 290 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 GCOM1H8Y6P7 765 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 EIF3JO75822 258 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CD4P01730 458 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 POLR2MP0CAP2 368 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CALM1P0DP23 149 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CALM2P0DP24 149 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CALM3P0DP25 149 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 RAG1P15918 1043 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CPT1AP50416 773 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 PSMC6P62333 389 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 PURAQ00577 322 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 TTLL4Q14679 1199 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 FANCBQ8NB91 859 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 IL31RAQ8NI17 732 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 RRP36Q96EU6 259 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 TCEANC2Q96MN5 208 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
SNRPA1-206ENST00000558059 COL6A3P12111 3177 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 RGS20O76081 388 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 TIMP1P01033 207 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 MYL3P08590 195 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 HSPA4P34932 840 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 EPHB4P54760 987 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 ARHGAP1Q07960 439 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 KRT32Q14532 448 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 SHHQ15465 462 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 LY6KQ17RY6 165 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 C9orf50Q5SZB4 431 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 APOA5Q6Q788 366 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 TMTC3Q6ZXV5 915 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 VSIG10LQ86VR7 867 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 MTG1Q9BT17 334 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 SEZ6LQ9BYH1 1024 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 PPP4R2Q9NY27 417 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 BRPF3Q9ULD4 1205 aa10.15□□□□□ -0.78
SNRPA1-206ENST00000558059 hCG_1642624A0A1W2PR95 340 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 MEIS2O14770 477 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 TLR3O15455 904 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 KPNA6O60684 536 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 GH1P01241 217 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 MYCLP12524 364 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 CPA1P15085 419 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 FUT2Q10981 343 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 PGM5Q15124 567 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 MICU3Q86XE3 530 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 AFG1LQ8WV93 481 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 TRPV6Q9H1D0 765 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 ALDH8A1Q9H2A2 487 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 SNX14Q9Y5W7 946 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 DOCK5Q9H7D0 1870 aa10.14□□□□□ -0.79
SNRPA1-206ENST00000558059 FRMPD4Q14CM0 1322 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 PIK3CDO00329 1044 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 ZBTB43O43298 467 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 B4GALT4O60513 344 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 MMP3P08254 477 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 CCND2P30279 289 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms