RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PSME4Q14997 1843 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 ECM29Q5VYK3 1845 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 TRIM75PA6NK02 468 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 PHF20L1A8MW92 1017 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 F5H6K3 240 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 CUTAO60888 179 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 PFKFB1P16118 471 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 CALML3P27482 149 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 SLC16A2P36021 539 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 KLRC3Q07444 240 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 ZNF174Q15697 407 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 MAP3K11Q16584 847 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 CCDC96Q2M329 555 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 TBC1D10BQ4KMP7 808 aaPredicted RBP8.43□□□□□ -1.06
SPG11-204ENST00000557866 KIAA1755Q5JYT7 1200 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 RESP18Q5W5W9 173 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 ADGRF4Q8IZF3 695 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 GMCL1P1Q8NEA9 526 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 DCAF4Q8WV16 495 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
SPG11-204ENST00000557866 ZMYND12Q9H0C1 365 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
SPG11-204ENST00000557866 GREB1LQ9C091 1923 aaPredicted RBP8.42□□□□□ -1.06
SPG11-204ENST00000557866 SMCO2A6NFE2 343 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 ZBBXA8MT70 800 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 SPINT1O43278 529 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 MYO1BO43795 1136 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 EDIL3O43854 480 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 ECE1P42892 770 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 TRAPPC10P48553 1259 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 NAPAP54920 295 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 SPECC1Q5M775 1068 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 TTC38Q5R3I4 469 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 GPATCH4Q5T3I0 446 aaKnown RBP8.42□□□□□ -1.06
SPG11-204ENST00000557866 GALNT17Q6IS24 598 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
SPG11-204ENST00000557866 C4orf32Q8N8J7 132 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 JMYQ8N9B5 988 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 RNF214Q8ND24 703 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 TRPM4Q8TD43 1214 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 COA7Q96BR5 231 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 SEC63Q9UGP8 760 aaKnown RBP8.42□□□□□ -1.06
SPG11-204ENST00000557866 ZBTB21Q9ULJ3 1066 aa8.42□□□□□ -1.06
SPG11-204ENST00000557866 SRPRBQ9Y5M8 271 aaKnown RBP8.42□□□□□ -1.06
SPG11-204ENST00000557866 PNMA6FA0A0J9YX94 578 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 ESPNB1AK53 854 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 SOCS7O14512 581 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 KINO60870 393 aaKnown RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 ZNF202O95125 648 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
SPG11-204ENST00000557866 LMNB1P20700 586 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 GMPRP36959 345 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 CAP2P40123 477 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 SLC1A4P43007 532 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 HIRAP54198 1017 aaPredicted RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 TYRO3Q06418 890 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 IL17AQ16552 155 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.06
SPG11-204ENST00000557866 USP49Q70CQ1 688 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 ILDR2Q71H61 639 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 CCDC84Q86UT8 332 aaPredicted RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 GPRC5DQ9NZD1 345 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 HACL1Q9UJ83 578 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 NOL7Q9UMY1 257 aaKnown RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 TMX2Q9Y320 296 aa8.41□□□□□ -1.06
SPG11-204ENST00000557866 BAZ2BQ9UIF8 2168 aaKnown RBP8.41□□□□□ -1.06
SPG11-204ENST00000557866 A0A087WWV3 80 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 ZBTB5O15062 677 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 CTAGE5O15320 804 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 TAL1P17542 331 aaPredicted RBP8.4□□□□□ -1.06
SPG11-204ENST00000557866 EPS15P42566 896 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 SYKP43405 635 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 TNNI2P48788 182 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 SNAP25P60880 206 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 ATP2C1P98194 919 aaPredicted RBP8.4□□□□□ -1.06
SPG11-204ENST00000557866 QRICH1Q2TAL8 776 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
SPG11-204ENST00000557866 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 CCDC12Q8WUD4 166 aaPredicted RBP8.4□□□□□ -1.06
SPG11-204ENST00000557866 ERCC4Q92889 916 aaPredicted RBP8.4□□□□□ -1.06
SPG11-204ENST00000557866 CSRNP2Q9H175 543 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 DEFB129Q9H1M3 183 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 TMEM60Q9H2L4 133 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 C6orf50Q9HD87 102 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 TMEM260Q9NX78 707 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 DNMT3LQ9UJW3 386 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 SYNPO2Q9UMS6 1093 aa8.4□□□□□ -1.06
SPG11-204ENST00000557866 CEP131Q9UPN4 1083 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms