RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 ZNF174Q15697 407 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 LONRF1Q17RB8 773 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 DUOXA2Q1HG44 320 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PKDCCQ504Y2 493 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 L1TD1Q5T7N2 865 aaKnown RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 BROXQ5VW32 411 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CYB5RLQ6IPT4 315 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 LETMD1Q6P1Q0 360 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 XRRA1Q6P2D8 792 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 B3GNT9Q6UX72 402 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 LBX2Q6XYB7 198 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 C20orf204Q6ZNR8 217 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 TTLL7Q6ZT98 887 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 UBE3DQ7Z6J8 389 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 RASSF3Q86WH2 238 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CRIPAKQ8N1N5 446 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 MIER2Q8N344 545 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 GALNT11Q8NCW6 608 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDH19Q8TAB3 1148 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 NPLOC4Q8TAT6 608 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 COPS5Q92905 334 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 FBXW5Q969U6 566 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 TEKT5Q96M29 485 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 FAM193BQ96PV7 902 aaPredicted RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 TAAR9Q96RI9 348 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 MIPEPQ99797 713 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PAGR1Q9BTK6 254 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 SLC12A5Q9H2X9 1139 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 JADE2Q9NQC1 790 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 OXSMQ9NWU1 459 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 GTF2IRD1Q9UHL9 959 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 NOC2LQ9Y3T9 749 aaKnown RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA9Q9Y5G4 932 aaKnown RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA8Q9Y5G5 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA7Q9Y5G6 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA6Q9Y5G7 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA3Q9Y5H0 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA2Q9Y5H1 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 NPFFR2Q9Y5X5 522 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 ST14Q9Y5Y6 855 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 BACE2Q9Y5Z0 518 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 KAT6BQ8WYB5 2073 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CCDC66A2RUB6 948 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 FAM47E-STBD1D6RA91 191 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 H0Y8X5 98 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 STXBP3O00186 592 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 TM4SF5O14894 197 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 PIP5K1CO60331 668 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 DGAT1O75907 488 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 ZRANB2O95218 330 aaKnown RBP eCLIP4.67□□□□□ -1.66
TDP1-217ENST00000557782 GSNP06396 782 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 CD3EP07766 207 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 ADH5P11766 374 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 ZKSCAN1P17029 563 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 CCT5P48643 541 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 USP14P54578 494 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 TESK1Q15569 626 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 PDCD2Q16342 344 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 NUTM2GQ5VZR2 741 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 IQCEQ6IPM2 695 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 DYMQ7RTS9 669 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 CDH24Q86UP0 819 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 KSR1Q8IVT5 923 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 VWA5B2Q8N398 1253 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 CISD2Q8N5K1 135 aaKnown RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 GOLGA6L1Q8N7Z2 621 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 UBASH3BQ8TF42 649 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 FRS2Q8WU20 508 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 ATXN2LQ8WWM7 1075 aaKnown RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 SSH1Q8WYL5 1049 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 TRIM63Q969Q1 353 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 KIFC2Q96AC6 838 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 NAA15Q9BXJ9 866 aaKnown RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 TMPRSS13Q9BYE2 586 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 ASCC2Q9H1I8 757 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 CHST7Q9NS84 486 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 GPATCH2Q9NW75 528 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 GGA1Q9UJY5 639 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 DNM3Q9UQ16 869 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 STARD13Q9Y3M8 1113 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 IPPQ9Y573 584 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 RPS6KL1Q9Y6S9 549 aa4.67□□□□□ -1.66
TDP1-217ENST00000557782 COL17A1Q9UMD9 1497 aaPredicted RBP4.67□□□□□ -1.66
TDP1-217ENST00000557782 MEGF11A6BM72 1044 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 C2orf71A6NGG8 1288 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 WNT9AO14904 365 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 AURKAO14965 403 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 SIGLEC6O43699 453 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
TDP1-217ENST00000557782 HRGP04196 525 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 CYP7A1P22680 504 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 ASPAP45381 313 aa4.66□□□□□ -1.66
TDP1-217ENST00000557782 NOP2P46087 812 aaKnown RBP4.66□□□□□ -1.66
TDP1-217ENST00000557782 ALDH5A1P51649 535 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms