RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 BRDTQ58F21 947 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 PRAMEF19Q5SWL8 479 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 NIPA1Q7RTP0 329 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 RNF180Q86T96 592 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 NLRX1Q86UT6 975 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 INTS4Q96HW7 963 aaKnown RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 INPP4AQ96PE3 977 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 TSEN34Q9BSV6 310 aaKnown RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 WDR11Q9BZH6 1224 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 VPS54Q9P1Q0 977 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 CST5P28325 142 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 RGS19P49795 217 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 GJA9P57773 515 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 BLIDQ8IZY5 108 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 GPRASP2Q96D09 838 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 PURBQ96QR8 312 aaKnown RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 NAP1L4Q99733 375 aaKnown RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 SENP7Q9BQF6 1050 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 SEZ6LQ9BYH1 1024 aa15.64■□□□□ 0.09
SHMT2-234ENST00000557703 UPF3AQ9H1J1 476 aaKnown RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 GNEQ9Y223 722 aaKnown RBP15.64■□□□□ 0.09
SHMT2-234ENST00000557703 DNM1LO00429 736 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 FIBPO43427 364 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 ZEB2O60315 1214 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 MYCLP12524 364 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-234ENST00000557703 CUL4AQ13619 759 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 SAFBQ15424 915 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHMT2-234ENST00000557703 CCDC62Q6P9F0 684 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 KRT25Q7Z3Z0 450 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 FBXO16Q8IX29 292 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-234ENST00000557703 EMID1Q96A84 441 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-234ENST00000557703 ANO3Q9BYT9 981 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 AP5M1Q9H0R1 490 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 XPNPEP3Q9NQH7 507 aa15.63■□□□□ 0.09
SHMT2-234ENST00000557703 MOXD2PA6NHM9 499 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 K7ELQ4 463 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-234ENST00000557703 M0R2N6 131 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 KPNA6O60684 536 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
SHMT2-234ENST00000557703 CIITAP33076 1130 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 ST3GAL1Q11201 340 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 NEDD9Q14511 834 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 UBE2SQ16763 222 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 MOXD1Q6UVY6 613 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 CRYGNQ8WXF5 182 aa15.62■□□□□ 0.09
SHMT2-234ENST00000557703 KIAA1217Q5T5P2 1943 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 SPATA31C2B4DYI2 1134 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 KBTBD13C9JR72 458 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 CABYRO75952 493 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 CD2BP2O95400 341 aaKnown RBP15.61■□□□□ 0.09
SHMT2-234ENST00000557703 GH1P01241 217 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 MMP1P03956 469 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 SMPD1P17405 629 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 PDCP20941 246 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 ADCYAP1R1P41586 468 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 CPT1AP50416 773 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 MRPS9P82933 396 aaKnown RBP15.61■□□□□ 0.09
SHMT2-234ENST00000557703 ARHGAP4P98171 946 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 SETQ01105 290 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-234ENST00000557703 LAMC2Q13753 1193 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 CEP55Q53EZ4 464 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 EEPD1Q7L9B9 569 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 NECAB2Q7Z6G3 386 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 KLHDC9Q8NEP7 349 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 FBXO18Q8NFZ0 1043 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 C8orf76Q96K31 380 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
SHMT2-234ENST00000557703 UBIAD1Q9Y5Z9 338 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 MRVI1Q9Y6F6 885 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 BRCA2P51587 3418 aa15.61■□□□□ 0.09
SHMT2-234ENST00000557703 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 JAK2O60674 1132 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 PPFIA3O75145 1194 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 ADAMTS4O75173 837 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 MYCP01106 439 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-234ENST00000557703 KRT2P35908 639 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 NONOQ15233 471 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHMT2-234ENST00000557703 LRRC41Q15345 812 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 NPY5RQ15761 445 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 SEPT14Q6ZU15 432 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 TLK2Q86UE8 772 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 HSCBQ8IWL3 235 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 MXRA8Q9BRK3 442 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 FOXP1Q9H334 677 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-234ENST00000557703 JADE2Q9NQC1 790 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 PDGFCQ9NRA1 345 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 SMC3Q9UQE7 1217 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 LRRC37A2A6NM11 1700 aa15.6■□□□□ 0.09
SHMT2-234ENST00000557703 CCDC194A0A1B0GVG4 234 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 A6NJR5 290 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 MEIS1O00470 390 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 CAPN15O75808 1086 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 RGS20O76081 388 aa15.59■□□□□ 0.09
SHMT2-234ENST00000557703 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-234ENST00000557703 GCFC2P16383 781 aaKnown RBP15.59■□□□□ 0.09
SHMT2-234ENST00000557703 EN2P19622 333 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms