RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TOB2Q14106 344 aaPredicted RBP18.27■□□□□ 0.52
TUBB3-214ENST00000557490 TTLL4Q14679 1199 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 KCNA10Q16322 511 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 MYLIPQ8WY64 445 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 FAM122AQ96E09 287 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 PDCD2LQ9BRP1 358 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 PIK3CDO00329 1044 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.515e-7■□□□□ 10.7
TUBB3-214ENST00000557490 ZEB2O60315 1214 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
TUBB3-214ENST00000557490 PDIA3P30101 505 aaKnown RBP18.26■□□□□ 0.51
TUBB3-214ENST00000557490 NKX3-2P78367 333 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 FSCN1Q16658 493 aaKnown RBP18.26■□□□□ 0.51
TUBB3-214ENST00000557490 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 SEPT14Q6ZU15 432 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
TUBB3-214ENST00000557490 NID2Q14112 1375 aa18.26■□□□□ 0.51
TUBB3-214ENST00000557490 A0A1W2PQ45 241 aaPredicted RBP18.25■□□□□ 0.51
TUBB3-214ENST00000557490 A0A1W2PQY0 241 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 SEC24BO95487 1268 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 TXNP10599 105 aaKnown RBP18.25■□□□□ 0.51
TUBB3-214ENST00000557490 CCND2P30279 289 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 RTP1P59025 263 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 BEX3Q00994 111 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
TUBB3-214ENST00000557490 PGM5Q15124 567 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 TMEM63BQ5T3F8 832 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 CCSAPQ6IQ19 270 aaPredicted RBP18.25■□□□□ 0.51
TUBB3-214ENST00000557490 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
TUBB3-214ENST00000557490 STARD7Q9NQZ5 370 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 LRRC37A2A6NM11 1700 aa18.25■□□□□ 0.51
TUBB3-214ENST00000557490 CTAGE5O15320 804 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 ASGR1P07306 291 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 NAPAP54920 295 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
TUBB3-214ENST00000557490 IRX5P78411 483 aaPredicted RBP18.24■□□□□ 0.51
TUBB3-214ENST00000557490 TJAP1Q5JTD0 557 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 PPP1R18Q6NYC8 613 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 VSIG10LQ86VR7 867 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 VTI1AQ96AJ9 217 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
TUBB3-214ENST00000557490 GLT1D1Q96MS3 346 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
TUBB3-214ENST00000557490 MEIS2O14770 477 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 FOSL2P15408 326 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 PTGS1P23219 599 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-214ENST00000557490 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 BRDTQ58F21 947 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-214ENST00000557490 IL31RAQ8NI17 732 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 LBHD1Q9BQE6 289 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-214ENST00000557490 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
TUBB3-214ENST00000557490 TTYH1Q9H313 450 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-214ENST00000557490 LTBP2Q14767 1821 aa18.23■□□□□ 0.51
TUBB3-214ENST00000557490 TMEM265A0A087WTH1 108 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 SPDYE3A6NKU9 549 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 STXBP3O00186 592 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 CPLX1O14810 134 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
TUBB3-214ENST00000557490 CABYRO75952 493 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 SCG2P13521 617 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 CPT1AP50416 773 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 SNX17Q15036 470 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 PFKFB3Q16875 520 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-214ENST00000557490 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 C1orf53Q5VUE5 145 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
TUBB3-214ENST00000557490 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 GLT8D2Q9H1C3 349 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-214ENST00000557490 NCOA5Q9HCD5 579 aaKnown RBP18.22■□□□□ 0.51
TUBB3-214ENST00000557490 BARHL2Q9NY43 387 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 MRVI1Q9Y6F6 885 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 ELP1O95163 1332 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
TUBB3-214ENST00000557490 STAM2O75886 525 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 ARIH2O95376 493 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 GH1P01241 217 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 IFNAR1P17181 557 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 ADCY7P51828 1080 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 UBE2SQ16763 222 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 LY6KQ17RY6 165 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 KCNV1Q6PIU1 500 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 COPS5Q92905 334 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 PHKBQ93100 1093 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
TUBB3-214ENST00000557490 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
TUBB3-214ENST00000557490 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms