RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 WNT8BQ93098 351 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
NEDD1-211ENST00000557454 CRNKL1Q9BZJ0 848 aaKnown RBP11.33□□□□□ -0.6
NEDD1-211ENST00000557454 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 DCP1AQ9NPI6 582 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-211ENST00000557454 RAD50Q92878 1312 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 A6NJR5 290 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 KPNA6O60684 536 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 RB1P06400 928 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 ATF7P17544 494 aaPredicted RBP11.32□□□□□ -0.6
NEDD1-211ENST00000557454 BMPR1AP36894 532 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 CDK8P49336 464 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 OAZ1P54368 228 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 MTMR3Q13615 1198 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 CAMK1Q14012 370 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 CWF19L1Q69YN2 538 aaKnown RBP11.32□□□□□ -0.6
NEDD1-211ENST00000557454 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 UBALD2Q8IYN6 164 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 FIBCD1Q8N539 461 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 COPS5Q92905 334 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 TOP1MTQ969P6 601 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 MEIS3Q99687 375 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 IFIH1Q9BYX4 1025 aaKnown RBP11.32□□□□□ -0.6
NEDD1-211ENST00000557454 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
NEDD1-211ENST00000557454 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
NEDD1-211ENST00000557454 R4GN57 208 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
NEDD1-211ENST00000557454 F5H6K3 240 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 NRIP1P48552 1158 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 CLCN5P51795 746 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 KLRC3Q07444 240 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 TRIM71Q2Q1W2 868 aaKnown RBP11.31□□□□□ -0.6
NEDD1-211ENST00000557454 KIAA0319Q5VV43 1072 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 CCDC105Q8IYK2 499 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 FLCNQ8NFG4 579 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 HAUS7Q99871 368 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 SEMA4AQ9H3S1 761 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 SORCS3Q9UPU3 1222 aa11.31□□□□□ -0.6
NEDD1-211ENST00000557454 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
NEDD1-211ENST00000557454 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 ATXN1P54253 815 aaKnown RBP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 RBM10P98175 930 aaKnown RBP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 TNNI3KQ59H18 835 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 SSH1Q8WYL5 1049 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 RUBCNQ92622 972 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 ZNF512BQ96KM6 892 aaPredicted RBP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 TRERF1Q96PN7 1200 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEDD1-211ENST00000557454 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 FPGT-TNNI3KV9GXZ4 949 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
NEDD1-211ENST00000557454 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.29□□□□□ -0.6
NEDD1-211ENST00000557454 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
NEDD1-211ENST00000557454 PI15O43692 258 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 ADRB1P08588 477 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 ALAS1P13196 640 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 DNAJB1P25685 340 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
NEDD1-211ENST00000557454 PTK7Q13308 1070 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 MTX1Q13505 466 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 PLEKHG4Q58EX7 1191 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 LCORLQ8N3X6 602 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 KAT2BQ92831 832 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 IL17RAQ96F46 866 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 TLR7Q9NYK1 1049 aaKnown RBP11.29□□□□□ -0.6
NEDD1-211ENST00000557454 GTF2IRD1Q9UHL9 959 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 FEM1BQ9UK73 627 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
NEDD1-211ENST00000557454 SPEGQ15772 3267 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEDD1-211ENST00000557454 ALDH5A1P51649 535 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-211ENST00000557454 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
NEDD1-211ENST00000557454 DTWD2Q8NBA8 298 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 MYH8P13535 1937 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
NEDD1-211ENST00000557454 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 AOC1P19801 751 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
NEDD1-211ENST00000557454 PDE4BQ07343 736 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 C7orf31Q8N865 590 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 VN1R2Q8NFZ6 395 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 SEPT8Q92599 483 aa11.27□□□□□ -0.61
NEDD1-211ENST00000557454 CLP1Q92989 425 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms