RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 COG1Q8WTW3 980 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 HAS1Q92839 578 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 TANGO6Q9C0B7 1094 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 NLRC4Q9NPP4 1024 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 SALL4Q9UJQ4 1053 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 FXR2P51116 673 aaKnown RBP eCLIP19.69■□□□□ 0.74
XRCC3-218ENST00000557439 VAV2P52735 878 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 CACNB3P54284 484 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 DDR1Q08345 913 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 KIF5AQ12840 1032 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.69■□□□□ 0.74
XRCC3-218ENST00000557439 IFIH1Q9BYX4 1025 aaKnown RBP19.69■□□□□ 0.74
XRCC3-218ENST00000557439 PCDHAC2Q9Y5I4 1007 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 ESYT2A0FGR8 921 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L15C9J2P7 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L13C9JLJ4 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L11C9JVI0 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L18D6R9N7 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L22D6RA61 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L17D6RBQ6 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L19D6RCP7 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L20D6RJB6 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 E9PMD0 336 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 NCK2O43639 380 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 TAL1P17542 331 aaPredicted RBP19.68■□□□□ 0.74
XRCC3-218ENST00000557439 MATR3P43243 847 aaKnown RBP eCLIP19.68■□□□□ 0.74
XRCC3-218ENST00000557439 KIF11P52732 1056 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 GABPAQ06546 454 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L24Q0WX57 530 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 KRT79Q5XKE5 535 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L6PQ6QN14 398 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 LRRC55Q6ZSA7 311 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 NELFCDQ8IXH7 590 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 RETREG2Q8NC44 543 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 SECISBP2LQ93073 1101 aaKnown RBP19.68■□□□□ 0.74
XRCC3-218ENST00000557439 RBM17Q96I25 401 aaKnown RBP19.68■□□□□ 0.74
XRCC3-218ENST00000557439 NOVP48745 357 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 ZFPM1Q8IX07 1006 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 CCDC170Q8IYT3 715 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 CRACR2AQ9BSW2 395 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 DDX25Q9UHL0 483 aaKnown RBP19.68■□□□□ 0.74
XRCC3-218ENST00000557439 PLAGL2Q9UPG8 496 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 PCDHA13Q9Y5I0 950 aa19.68■□□□□ 0.74
XRCC3-218ENST00000557439 MYH7BA7E2Y1 1941 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 MARCH6O60337 910 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 SNAP25P60880 206 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 GFPT1Q06210 699 aaPredicted RBP19.67■□□□□ 0.74
XRCC3-218ENST00000557439 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 SPA17Q15506 151 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 HDAC7Q8WUI4 952 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 FAM163AQ96GL9 167 aaPredicted RBP19.67■□□□□ 0.74
XRCC3-218ENST00000557439 DEF6Q9H4E7 631 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 NFIAQ12857 509 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 ENOX2Q16206 610 aaKnown RBP19.67■□□□□ 0.74
XRCC3-218ENST00000557439 NFRKBQ6P4R8 1299 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 PURBQ96QR8 312 aaKnown RBP19.67■□□□□ 0.74
XRCC3-218ENST00000557439 STK17AQ9UEE5 414 aa19.67■□□□□ 0.74
XRCC3-218ENST00000557439 AKR1B10O60218 316 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 STAT3P40763 770 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 NT5C2P49902 561 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 DNA2P51530 1060 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 FAM193AP78312 1265 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 MAN2A1Q16706 1144 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 ASPRV1Q53RT3 343 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 WDR93Q6P2C0 686 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 CERKQ8TCT0 537 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 POLD4Q9HCU8 107 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 USP40Q9NVE5 1235 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 NHSQ6T4R5 1651 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 BUB1O43683 1085 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 SHMT1P34896 483 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 KCNMA1Q12791 1236 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 COASYQ13057 564 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 GUF1Q8N442 669 aaKnown RBP19.66■□□□□ 0.74
XRCC3-218ENST00000557439 DNAJC19Q96DA6 116 aa19.66■□□□□ 0.74
XRCC3-218ENST00000557439 IGKV6D-41A0A0C4DH26 115 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 SNHG28P0DPA3 235 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 SMARCA1P28370 1054 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 BAP1Q92560 729 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 PLEKHA4Q9H4M7 779 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 KCNQ5Q9NR82 932 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 CALCOCO1Q9P1Z2 691 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 PNMA6FA0A0J9YX94 578 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 PVALEFA0A1B0GWK0 134 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 A0A1W2PQJ5 194 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 POTEB3A0JP26 581 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 POTECB2RU33 542 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 TRAF5O00463 557 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 TTLL1O95922 423 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 TMEM119Q4V9L6 283 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 POTEBQ6S5H4 581 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 TXLNBQ8N3L3 684 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
XRCC3-218ENST00000557439 EIF3JO75822 258 aaKnown RBP19.64■□□□□ 0.73
XRCC3-218ENST00000557439 SLC7A5Q01650 507 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 RASSF7Q02833 373 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 ARID5AQ03989 594 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms