RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GH1P01241 217 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 RFC2P35250 354 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-210ENST00000557431 GRB10Q13322 594 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 BFSP2Q13515 415 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-210ENST00000557431 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
SLIRP-210ENST00000557431 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-210ENST00000557431 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 MTUS1Q9ULD2 1270 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 ABCB11O95342 1321 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 ZNF213O14771 459 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-210ENST00000557431 TLL1O43897 1013 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 KPNA6O60684 536 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 WDR5P61964 334 aaKnown RBP16.47■□□□□ 0.23
SLIRP-210ENST00000557431 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-210ENST00000557431 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 ENAHQ8N8S7 591 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-210ENST00000557431 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 RNF41Q9H4P4 317 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-210ENST00000557431 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 TRANK1O15050 2925 aa16.47■□□□□ 0.23
SLIRP-210ENST00000557431 XIRP2A4UGR9 3374 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 LPXNO60711 386 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 NBNO60934 754 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 CFBP00751 764 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 KCNJ6P48051 423 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 PSEN2P49810 448 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 HIC1Q14526 733 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 LRRC8DQ7L1W4 858 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 FBXO11Q86XK2 927 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 DGKHQ86XP1 1220 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 PLEKHM2Q8IWE5 1019 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 IL25Q9H293 177 aa16.46■□□□□ 0.23
SLIRP-210ENST00000557431 B4DLN1 442 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 OPLAHO14841 1288 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
SLIRP-210ENST00000557431 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
SLIRP-210ENST00000557431 STXBP2Q15833 593 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 ARHGEF16Q5VV41 709 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 IQCA1Q86XH1 822 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 IL31RAQ8NI17 732 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 PHOSPHO2Q8TCD6 241 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 NSUN6Q8TEA1 469 aaKnown RBP16.45■□□□□ 0.22
SLIRP-210ENST00000557431 AFAP1L1Q8TED9 768 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
SLIRP-210ENST00000557431 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 GTF2IRD1Q9UHL9 959 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
SLIRP-210ENST00000557431 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
SLIRP-210ENST00000557431 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 IGHDP01880 384 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 PCP11498 1178 aaKnown RBP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 CKBP12277 381 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 SELPP16109 830 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 RGS22Q8NE09 1264 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
SLIRP-210ENST00000557431 ZBED2Q9BTP6 218 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 EPHX3Q9H6B9 360 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 MRVI1Q9Y6F6 885 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
SLIRP-210ENST00000557431 RGS20O76081 388 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 NR3C2P08235 984 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 POU3F3P20264 500 aaPredicted RBP16.43■□□□□ 0.22
SLIRP-210ENST00000557431 MBTPS1Q14703 1052 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 MFSD10Q14728 455 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 ZNF618Q5T7W0 954 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 SESTD1Q86VW0 696 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 C7orf31Q8N865 590 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 KHSRPQ92945 711 aaKnown RBP eCLIP16.43■□□□□ 0.22
SLIRP-210ENST00000557431 BCAS3Q9H6U6 928 aa16.43■□□□□ 0.22
SLIRP-210ENST00000557431 MRPL11Q9Y3B7 192 aaKnown RBP16.43■□□□□ 0.22
SLIRP-210ENST00000557431 KIAA1671Q9BY89 1806 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
SLIRP-210ENST00000557431 DGKDQ16760 1214 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
SLIRP-210ENST00000557431 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLIRP-210ENST00000557431 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
SLIRP-210ENST00000557431 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms