RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 MXRA8Q9BRK3 442 aa13.62□□□□□ -0.23
APEX1-219ENST00000557365 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
APEX1-219ENST00000557365 UBIAD1Q9Y5Z9 338 aa13.62□□□□□ -0.23
APEX1-219ENST00000557365 KIAA1217Q5T5P2 1943 aa13.62□□□□□ -0.23
APEX1-219ENST00000557365 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 WNT7AO00755 349 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 SPTLC2O15270 562 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 NEMFO60524 1076 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 TRPA1O75762 1119 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 EIF3JO75822 258 aaKnown RBP13.61□□□□□ -0.23
APEX1-219ENST00000557365 FCGRTP55899 365 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
APEX1-219ENST00000557365 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
APEX1-219ENST00000557365 CNTN2Q02246 1040 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 MAP2K5Q13163 448 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 PTGDRQ13258 359 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 ARHGEF6Q15052 776 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 ZNF174Q15697 407 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 STXBP2Q15833 593 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 MAMDC4Q6UXC1 1216 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 CDHR1Q96JP9 859 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 FGD4Q96M96 766 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 FAM20AQ96MK3 541 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 MTMR9Q96QG7 549 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 JADE2Q9NQC1 790 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
APEX1-219ENST00000557365 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
APEX1-219ENST00000557365 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 COBLO75128 1261 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 TDP2O95551 362 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 TBC1D8O95759 1140 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 XRCC5P13010 732 aaKnown RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 EIF2AK2P19525 551 aaKnown RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 ATP2B1P20020 1258 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 MCM4P33991 863 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 MCM7P33993 719 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 ZNF76P36508 570 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 KIF22Q14807 665 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 LENG9Q96B70 501 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 INPP4AQ96PE3 977 aaPredicted RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 SRPRBQ9Y5M8 271 aaKnown RBP13.6□□□□□ -0.23
APEX1-219ENST00000557365 ASTN1O14525 1302 aa13.6□□□□□ -0.23
APEX1-219ENST00000557365 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 GPR25O00155 361 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 TNPO2O14787 897 aaKnown RBP13.59□□□□□ -0.23
APEX1-219ENST00000557365 FIBPO43427 364 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 CUTAO60888 179 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 IGHA2P01877 340 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 PGK2P07205 417 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 ITGB5P18084 799 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 ICAM3P32942 547 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 RGS2P41220 211 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 PSMC4P43686 418 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 PDIA5Q14554 519 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 NBR1Q14596 966 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 DPP9Q86TI2 863 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 KRI1Q8N9T8 703 aaKnown RBP13.59□□□□□ -0.23
APEX1-219ENST00000557365 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 FTOQ9C0B1 505 aaKnown RBP eCLIP13.59□□□□□ -0.23
APEX1-219ENST00000557365 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 SYNGAP1Q96PV0 1343 aa13.59□□□□□ -0.23
APEX1-219ENST00000557365 MCM3APO60318 1980 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 SLC37A4O43826 429 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 TGFB3P10600 412 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 HOXD10P28358 340 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■□□□□ 8.7
APEX1-219ENST00000557365 PRMT2P55345 433 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.24
APEX1-219ENST00000557365 PDE4DQ08499 809 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 CALCRLQ16602 461 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 AXDND1Q5T1B0 1012 aaPredicted RBP13.58□□□□□ -0.24
APEX1-219ENST00000557365 OLFML2BQ68BL8 750 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 PLA2G4DQ86XP0 818 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
APEX1-219ENST00000557365 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 MAML3Q96JK9 1138 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
APEX1-219ENST00000557365 TRIM47Q96LD4 638 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms