RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-206ENST00000557358 KIAA1217Q5T5P2 1943 aa15.88■□□□□ 0.13
VPS33B-206ENST00000557358 ARVCFO00192 962 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 CPLX1O14810 134 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 MYL3P08590 195 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 TGFB3P10600 412 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 COL9A3Q14050 684 aaPredicted RBP15.87■□□□□ 0.13
VPS33B-206ENST00000557358 HABP4Q5JVS0 413 aaKnown RBP15.87■□□□□ 0.13
VPS33B-206ENST00000557358 CXCL17Q6UXB2 119 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 DHX37Q8IY37 1157 aaKnown RBP15.87■□□□□ 0.13
VPS33B-206ENST00000557358 TRIM22Q8IYM9 498 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 MTG1Q9BT17 334 aaPredicted RBP15.87■□□□□ 0.13
VPS33B-206ENST00000557358 UBE2OQ9C0C9 1292 aaKnown RBP15.87■□□□□ 0.13
VPS33B-206ENST00000557358 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 TMEM39AQ9NV64 488 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
VPS33B-206ENST00000557358 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
VPS33B-206ENST00000557358 ADCY7P51828 1080 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 LAMC2Q13753 1193 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 ANKRD1Q15327 319 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 NLRX1Q86UT6 975 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 AGXT2Q9BYV1 514 aa15.86■□□□□ 0.13
VPS33B-206ENST00000557358 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-206ENST00000557358 RAG1P15918 1043 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 BMP8BP34820 402 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 DGKDQ16760 1214 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 LY6KQ17RY6 165 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 MCTP2Q6DN12 878 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.13
VPS33B-206ENST00000557358 CDHR1Q96JP9 859 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 UPF3BQ9BZI7 483 aaKnown RBP15.85■□□□□ 0.13
VPS33B-206ENST00000557358 MLXIPQ9HAP2 919 aa15.85■□□□□ 0.13
VPS33B-206ENST00000557358 A6NJR5 290 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 CTAGE5O15320 804 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 SUPT20HL2P0C7V6 817 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 SCG2P13521 617 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 ADD1P35611 737 aaKnown RBP15.84■□□□□ 0.13
VPS33B-206ENST00000557358 MDM2Q00987 491 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-206ENST00000557358 NEDD9Q14511 834 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 CCDC62Q6P9F0 684 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 CCDC148Q8NFR7 591 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 ZNF274Q96GC6 653 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-206ENST00000557358 GDF15Q99988 308 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 PDLIM7Q9NR12 457 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 BARHL2Q9NY43 387 aa15.84■□□□□ 0.13
VPS33B-206ENST00000557358 DDX41Q9UJV9 622 aaKnown RBP15.84■□□□□ 0.13
VPS33B-206ENST00000557358 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 SMCO2A6NFE2 343 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 NOP56O00567 594 aaKnown RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 MEIS2O14770 477 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 PRPF3O43395 683 aaKnown RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 FIBPO43427 364 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 CDKL5O76039 1030 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 GNA11P29992 359 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 PDIA3P30101 505 aaKnown RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 CDC27P30260 824 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 EVCP57679 992 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 PFKFB3Q16875 520 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 FAM47CQ5HY64 1035 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 WWC2Q6AWC2 1192 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 GIMAP8Q8ND71 665 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 BICD2Q8TD16 824 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 AFG1LQ8WV93 481 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 COPS5Q92905 334 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 RNF26Q9BY78 433 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-206ENST00000557358 C6orf50Q9HD87 102 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 RIC8AQ9NPQ8 531 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 MYH7BA7E2Y1 1941 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 FRMPD4Q14CM0 1322 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 NID2Q14112 1375 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.12
VPS33B-206ENST00000557358 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 ARIH2O95376 493 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 CDK7P50613 346 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 CHMP4BP1P59074 171 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 CCT2P78371 535 aaKnown RBP15.82■□□□□ 0.12
VPS33B-206ENST00000557358 PURAQ00577 322 aaKnown RBP15.82■□□□□ 0.12
VPS33B-206ENST00000557358 SSRP1Q08945 709 aaKnown RBP15.82■□□□□ 0.12
VPS33B-206ENST00000557358 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
VPS33B-206ENST00000557358 SPATA33Q96N06 139 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 SLC26A6Q9BXS9 759 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 PCDHA6Q9UN73 950 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 NOD1Q9Y239 953 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 PCDHA8Q9Y5H6 950 aa15.82■□□□□ 0.12
VPS33B-206ENST00000557358 STXBP3O00186 592 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 GGPS1O95749 300 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 MMP3P08254 477 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 IFNAR1P17181 557 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 ARHGAP1Q07960 439 aa15.81■□□□□ 0.12
VPS33B-206ENST00000557358 FUT2Q10981 343 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms