RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
VRK1-207ENST00000557352 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
VRK1-207ENST00000557352 GJB6O95452 261 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 CPP00450 1065 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 CELA3BP08861 270 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 CYP2C8P10632 490 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 BCL6P41182 706 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 SLC6A11P48066 632 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 KCNAB2Q13303 367 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 TESK1Q15569 626 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 PRSS53Q2L4Q9 553 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 ACBD5Q5T8D3 534 aaPredicted RBP6.92□□□□□ -1.3
VRK1-207ENST00000557352 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 MROH9Q5TGP6 573 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 ETV3LQ6ZN32 361 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 NLRP10Q86W26 655 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 MCF2L2Q86YR7 1114 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 MIB1Q86YT6 1006 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 Q8N1Y9 231 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 SEC14L1Q92503 715 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 ZBTB8AQ96BR9 441 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 X6R8D5 127 aa6.92□□□□□ -1.3
VRK1-207ENST00000557352 PRICKLE3O43900 615 aaPredicted RBP6.91□□□□□ -1.3
VRK1-207ENST00000557352 CAPNS1P04632 268 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 KCNJ6P48051 423 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 GTF2A2P52657 109 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 GFRA1P56159 465 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 NFKB2Q00653 900 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 PPIL6Q8IXY8 311 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 RCBTB1Q8NDN9 531 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 TRMT2BQ96GJ1 504 aaKnown RBP6.91□□□□□ -1.3
VRK1-207ENST00000557352 SYT3Q9BQG1 590 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 GORASP1Q9BQQ3 440 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 PALD1Q9ULE6 856 aa6.91□□□□□ -1.3
VRK1-207ENST00000557352 MYO1BO43795 1136 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.3
VRK1-207ENST00000557352 ZFYVE27Q5T4F4 411 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 PRRT2Q7Z6L0 340 aaPredicted RBP6.9□□□□□ -1.3
VRK1-207ENST00000557352 MILR1Q7Z6M3 343 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 FAM26EQ8N5C1 309 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 C1orf159Q96HA4 380 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 TMEM169Q96HH4 297 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 USP40Q9NVE5 1235 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 NTMQ9P121 344 aa6.9□□□□□ -1.3
VRK1-207ENST00000557352 NOBOXO60393 691 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 LCP1P13796 627 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 DNAJA1P31689 397 aaKnown RBP6.89□□□□□ -1.31
VRK1-207ENST00000557352 LTBRP36941 435 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
VRK1-207ENST00000557352 RTP5Q14D33 572 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 SLC10A6Q3KNW5 377 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 CD300LDQ6UXZ3 194 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 TTLL7Q6ZT98 887 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 HNRNPLLQ8WVV9 542 aaKnown RBP6.89□□□□□ -1.31
VRK1-207ENST00000557352 C11orf84Q9BUA3 381 aaPredicted RBP6.89□□□□□ -1.31
VRK1-207ENST00000557352 EPN3Q9H201 632 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 PCDH18Q9HCL0 1135 aa6.89□□□□□ -1.31
VRK1-207ENST00000557352 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
VRK1-207ENST00000557352 GRIA2P42262 883 aa6.88□□□□□ -1.31
VRK1-207ENST00000557352 SLC35F1Q5T1Q4 408 aa6.88□□□□□ -1.31
VRK1-207ENST00000557352 CELF2-AS1Q8N7Q2 184 aa6.88□□□□□ -1.31
VRK1-207ENST00000557352 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
VRK1-207ENST00000557352 PCDHA2Q9Y5H9 948 aa6.88□□□□□ -1.31
VRK1-207ENST00000557352 H7BY64 318 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 LSAMPQ13449 338 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 UBXN11Q5T124 520 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 DBX2Q6ZNG2 339 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 STK32CQ86UX6 486 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 ZC3H18Q86VM9 953 aaKnown RBP6.87□□□□□ -1.31
VRK1-207ENST00000557352 ZNF761Q86XN6 746 aaPredicted RBP6.87□□□□□ -1.31
VRK1-207ENST00000557352 FAM126BQ8IXS8 530 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 KYQ8NBH2 561 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 SLC43A3Q8NBI5 491 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 GMLQ99445 158 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 BDH2Q9BUT1 245 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 COA3Q9Y2R0 106 aaPredicted RBP6.87□□□□□ -1.31
VRK1-207ENST00000557352 R3HCC1Q9Y3T6 440 aaKnown RBP6.87□□□□□ -1.31
VRK1-207ENST00000557352 NPFFR2Q9Y5X5 522 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 DUSP10Q9Y6W6 482 aa6.87□□□□□ -1.31
VRK1-207ENST00000557352 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 AGRPO00253 132 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 THBS2P35442 1172 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 STAT5AP42229 794 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 GJA9P57773 515 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 PLP2Q04941 152 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 EFEMP1Q12805 493 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 GGNQ86UU5 652 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 ADAMTS17Q8TE56 1095 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms