RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
RDH11-210ENST00000557331 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
RDH11-210ENST00000557331 SCN5AQ14524 2016 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 FGAP02671 866 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 AMHP03971 560 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 CKBP12277 381 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 PTGS1P23219 599 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 TRAF1Q13077 416 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 MCMDC2Q4G0Z9 681 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 FAM178BQ8IXR5 827 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 PPTC7Q8NI37 304 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 ESR2Q92731 530 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 CHMP4CQ96CF2 233 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 PRKAG3Q9UGI9 489 aa11.96□□□□□ -0.49
RDH11-210ENST00000557331 MRPL11Q9Y3B7 192 aaKnown RBP11.96□□□□□ -0.49
RDH11-210ENST00000557331 TANC1Q9C0D5 1861 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 CAND2O75155 1236 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 TGFB3P10600 412 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 ARHGAP1Q07960 439 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
RDH11-210ENST00000557331 KRT40Q6A162 431 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
RDH11-210ENST00000557331 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 MRPL38Q96DV4 380 aaKnown RBP11.95□□□□□ -0.5
RDH11-210ENST00000557331 RMDN3Q96TC7 470 aa11.95□□□□□ -0.5
RDH11-210ENST00000557331 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
RDH11-210ENST00000557331 LCTP09848 1927 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 FRMPD2Q68DX3 1309 aaPredicted RBP11.94□□□□□ -0.5
RDH11-210ENST00000557331 LINC01553A4QN01 128 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 LGR5O75473 907 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 F2P00734 622 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 HSPD1P10809 573 aaKnown RBP11.94□□□□□ -0.5
RDH11-210ENST00000557331 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
RDH11-210ENST00000557331 PSEN2P49810 448 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 ARHGEF16Q5VV41 709 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 MIER1Q8N108 512 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 FBXO22Q8NEZ5 403 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
RDH11-210ENST00000557331 KAT2BQ92831 832 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 COPS5Q92905 334 aa11.94□□□□□ -0.5
RDH11-210ENST00000557331 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
RDH11-210ENST00000557331 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 HAS3O00219 553 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 FOXP2O15409 715 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 NBNO60934 754 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 ARIH2O95376 493 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 HOXD8P13378 290 aaPredicted RBP11.93□□□□□ -0.5
RDH11-210ENST00000557331 KCNA5P22460 613 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 HTRA4P83105 476 aaPredicted RBP11.93□□□□□ -0.5
RDH11-210ENST00000557331 MFSD10Q14728 455 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 GPNMBQ14956 572 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 KIAA0753Q2KHM9 967 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
RDH11-210ENST00000557331 DHX37Q8IY37 1157 aaKnown RBP11.93□□□□□ -0.5
RDH11-210ENST00000557331 GDPD5Q8WTR4 605 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 CTAGE1Q96RT6 745 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 MRVI1Q9Y6F6 885 aa11.93□□□□□ -0.5
RDH11-210ENST00000557331 LCHNA4D1U4 455 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 ARHGEF15O94989 841 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 NR3C2P08235 984 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 GNAT1P11488 350 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 DEFB103AP81534 67 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
RDH11-210ENST00000557331 USH1GQ495M9 461 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 CHST3Q7LGC8 479 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 NEK9Q8TD19 979 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
RDH11-210ENST00000557331 SEPT8Q92599 483 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 DHX38Q92620 1227 aaKnown RBP11.92□□□□□ -0.5
RDH11-210ENST00000557331 APBB2Q92870 758 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 PABPC5Q96DU9 382 aaKnown RBP11.92□□□□□ -0.5
RDH11-210ENST00000557331 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
RDH11-210ENST00000557331 C11orf16Q9NQ32 467 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 RWDD3Q9Y3V2 267 aa11.92□□□□□ -0.5
RDH11-210ENST00000557331 H3BNC9 293 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 DCXO43602 365 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 RB1P06400 928 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 GHRHRQ02643 423 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 PKN1Q16512 942 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 ZNF618Q5T7W0 954 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 FAM43BQ6ZT52 329 aaPredicted RBP11.91□□□□□ -0.5
RDH11-210ENST00000557331 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
RDH11-210ENST00000557331 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms