RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 DIRC2Q96SL1 478 aa5.74□□□□□ -1.49
CHD8-212ENST00000557329 CDK13Q14004 1512 aaKnown RBP5.74□□□□□ -1.49
CHD8-212ENST00000557329 STXBP3O00186 592 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 MYO1BO43795 1136 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 VAMP4O75379 141 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 CYBBP04839 570 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 HNRNPMP52272 730 aaKnown RBP eCLIP5.73□□□□□ -1.49
CHD8-212ENST00000557329 YBX1P67809 324 aaKnown RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 KCNAB2Q13303 367 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 HSP90AA2PQ14568 343 aaPredicted RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 DPY19L1Q2PZI1 675 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 ACBD5Q5T8D3 534 aaPredicted RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 PAQR3Q6TCH7 311 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 ZPBP2Q6X784 338 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 SYDE1Q6ZW31 735 aaPredicted RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 TMEM52Q8NDY8 209 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 HNRNPLLQ8WVV9 542 aaKnown RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 KCNN1Q92952 543 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 JMJD8Q96S16 334 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 CCDC113Q9H0I3 377 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 SIRT5Q9NXA8 310 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.73□□□□□ -1.49
CHD8-212ENST00000557329 IMPACTQ9P2X3 320 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 NPATQ14207 1427 aa5.73□□□□□ -1.49
CHD8-212ENST00000557329 SPAG9O60271 1321 aaKnown RBP5.73□□□□□ -1.49
CHD8-212ENST00000557329 TCAF2A6NFQ2 919 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 ZBTB7AO95365 584 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 MAPKAPK2P49137 400 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 RBL2Q08999 1139 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 TESK1Q15569 626 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
CHD8-212ENST00000557329 ZNF772Q68DY9 489 aaPredicted RBP5.72□□□□□ -1.49
CHD8-212ENST00000557329 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 SIAH1Q8IUQ4 282 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 NETO2Q8NC67 525 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
CHD8-212ENST00000557329 MKL1Q969V6 931 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 TNFRSF12AQ9NP84 129 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 CLTCQ00610 1675 aaKnown RBP5.72□□□□□ -1.49
CHD8-212ENST00000557329 DIP2CQ9Y2E4 1556 aa5.72□□□□□ -1.49
CHD8-212ENST00000557329 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
CHD8-212ENST00000557329 PLA2R1Q13018 1463 aa5.71□□□□□ -1.49
CHD8-212ENST00000557329 RFXAPO00287 272 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 APPP05067 770 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 ITGAVP06756 1048 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 CFPP27918 469 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 SCRN1Q12765 414 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 MAP4K2Q12851 820 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 RASGRF1Q13972 1273 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 ZNF605Q86T29 641 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 ZNF227Q86WZ6 799 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 LZTR1Q8N653 840 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 SREK1Q8WXA9 508 aaKnown RBP5.71□□□□□ -1.5
CHD8-212ENST00000557329 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 PLCD4Q9BRC7 762 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 WASHC2CQ9Y4E1 1318 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 MYO5CQ9NQX4 1742 aa5.71□□□□□ -1.5
CHD8-212ENST00000557329 TCOF1Q13428 1488 aaKnown RBP5.71□□□□□ -1.5
CHD8-212ENST00000557329 ABCA6Q8N139 1617 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 MYO3AQ8NEV4 1616 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 SNRPB2P08579 225 aaKnown RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 GTF2F1P35269 517 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD8-212ENST00000557329 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 MVKQ03426 396 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 RAB3GAP1Q15042 981 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 TARBP2Q15633 366 aaKnown RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 BICRALQ6AI39 1079 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 LILRA6Q6PI73 481 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 ZC3H14Q6PJT7 736 aaKnown RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 RSPO2Q6UXX9 243 aaPredicted RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 TMEM151BQ8IW70 566 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 PEX11GQ96HA9 241 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 IPO9Q96P70 1041 aaKnown RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 RAPGEFL1Q9UHV5 662 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 MSRB2Q9Y3D2 182 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 NPHP4O75161 1426 aaPredicted RBP5.7□□□□□ -1.5
CHD8-212ENST00000557329 CLIP1P30622 1438 aa5.7□□□□□ -1.5
CHD8-212ENST00000557329 AGLP35573 1532 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 TNRQ92752 1358 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 KIF3BO15066 747 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 PDPK1O15530 556 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
CHD8-212ENST00000557329 IFRD2Q12894 506 aaPredicted RBP5.69□□□□□ -1.5
CHD8-212ENST00000557329 CHRNA2Q15822 529 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 LCNL1Q6ZST4 164 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 NPM2Q86SE8 214 aaKnown RBP5.69□□□□□ -1.5
CHD8-212ENST00000557329 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 NLGN1Q8N2Q7 840 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 DIO2Q92813 273 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 ZFYVE21Q9BQ24 234 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 MCMBPQ9BTE3 642 aa5.69□□□□□ -1.5
CHD8-212ENST00000557329 AARSD1Q9BTE6 412 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms