RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
LGMN-215ENST00000557315 Q9Y3F1 56 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.24
LGMN-215ENST00000557315 EVI5O60447 810 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.24
LGMN-215ENST00000557315 SP2Q02086 613 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 SCRN1Q12765 414 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 STXBP2Q15833 593 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
LGMN-215ENST00000557315 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 TRIM60Q495X7 471 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 PSTPIP2Q9H939 334 aa16.52■□□□□ 0.24
LGMN-215ENST00000557315 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.24
LGMN-215ENST00000557315 LAMA2P24043 3122 aaKnown RBP16.52■□□□□ 0.23
LGMN-215ENST00000557315 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
LGMN-215ENST00000557315 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
LGMN-215ENST00000557315 SCG2P13521 617 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 STK3Q13188 491 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
LGMN-215ENST00000557315 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
LGMN-215ENST00000557315 TELO2Q9Y4R8 837 aa16.51■□□□□ 0.23
LGMN-215ENST00000557315 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 MOXD2PA6NHM9 499 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
LGMN-215ENST00000557315 SYN1P17600 705 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 CDK7P50613 346 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 NAPAP54920 295 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 NPY5RQ15761 445 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 ME3Q16798 604 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
LGMN-215ENST00000557315 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 RNF26Q9BY78 433 aaPredicted RBP16.5■□□□□ 0.23
LGMN-215ENST00000557315 TMEM260Q9NX78 707 aa16.5■□□□□ 0.23
LGMN-215ENST00000557315 LAMA3Q16787 3333 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 A6NJR5 290 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 EDIL3O43854 480 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 PFKFB2O60825 505 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 PDLIM7Q9NR12 457 aa16.49■□□□□ 0.23
LGMN-215ENST00000557315 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 hCG_1984214I3L0E3 225 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
LGMN-215ENST00000557315 ITGB5P18084 799 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 ITGB8P26012 769 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 CCND2P30279 289 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 ICAM3P32942 547 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 PSMC6P62333 389 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 TLE2Q04725 743 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 ZNF713Q8N859 430 aaPredicted RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 PCSK9Q8NBP7 692 aaKnown RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 AFG1LQ8WV93 481 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
LGMN-215ENST00000557315 ZMYND12Q9H0C1 365 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 AP5M1Q9H0R1 490 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 STARD7Q9NQZ5 370 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 ATP11BQ9Y2G3 1177 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
LGMN-215ENST00000557315 ELP1O95163 1332 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 TRIM43BA6NCK2 446 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 B4DLN1 442 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 MMP3P08254 477 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
LGMN-215ENST00000557315 ADCY7P51828 1080 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 NEK4P51957 841 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
LGMN-215ENST00000557315 ANKRD33Q7Z3H0 272 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 CUL5Q93034 780 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 TRIM43Q96BQ3 446 aaPredicted RBP16.47■□□□□ 0.23
LGMN-215ENST00000557315 GDF15Q99988 308 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 SPC25Q9HBM1 224 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 VPS54Q9P1Q0 977 aa16.47■□□□□ 0.23
LGMN-215ENST00000557315 UBIAD1Q9Y5Z9 338 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms