RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 SEZ6LQ9BYH1 1024 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
SYNE2-226ENST00000557084 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 KIAA0355O15063 1070 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 SLC34A2O95436 690 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 GH1P01241 217 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 CHMP4BP1P59074 171 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 GHRHRQ02643 423 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 FAAP100Q0VG06 881 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 LY6KQ17RY6 165 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 COPS5Q92905 334 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 MTG1Q9BT17 334 aaPredicted RBP13.75□□□□□ -0.21
SYNE2-226ENST00000557084 PSTPIP2Q9H939 334 aa13.75□□□□□ -0.21
SYNE2-226ENST00000557084 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 hCG_1642624A0A1W2PR95 340 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 CPA1P15085 419 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
SYNE2-226ENST00000557084 CDK7P50613 346 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 PSMC6P62333 389 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 PGM5Q15124 567 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 FAM47CQ5HY64 1035 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 Q6ZUG5 572 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 BRPF3Q9ULD4 1205 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 LCTP09848 1927 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 SZT2Q5T011 3432 aa13.74□□□□□ -0.21
SYNE2-226ENST00000557084 A6NJR5 290 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 ARIH2O95376 493 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYNE2-226ENST00000557084 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
SYNE2-226ENST00000557084 FPGSQ05932 587 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 DHX37Q8IY37 1157 aaKnown RBP13.73□□□□□ -0.21
SYNE2-226ENST00000557084 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 KCNB2Q92953 911 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 BRF1Q92994 677 aa13.73□□□□□ -0.21
SYNE2-226ENST00000557084 SPDYE3A6NKU9 549 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 EPB41L2O43491 1005 aaKnown RBP13.72□□□□□ -0.21
SYNE2-226ENST00000557084 TIMP1P01033 207 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 RPS6KB1P23443 525 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 RCAN1P53805 252 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 NAPAP54920 295 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 GPKOWQ92917 476 aaPredicted RBP eCLIP13.72□□□□□ -0.21
SYNE2-226ENST00000557084 TRPV6Q9H1D0 765 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
SYNE2-226ENST00000557084 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
SYNE2-226ENST00000557084 V9GY48 417 aaPredicted RBP13.72□□□□□ -0.21
SYNE2-226ENST00000557084 LRRC37A2A6NM11 1700 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 SORBS3O60504 671 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 STAM2O75886 525 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 TGFB3P10600 412 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
SYNE2-226ENST00000557084 ARHGAP1Q07960 439 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 DGKDQ16760 1214 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 LRIT3Q3SXY7 679 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
SYNE2-226ENST00000557084 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
SYNE2-226ENST00000557084 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
SYNE2-226ENST00000557084 MEIS2O14770 477 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 EIF5BO60841 1220 aaKnown RBP13.7□□□□□ -0.22
SYNE2-226ENST00000557084 GGPS1O95749 300 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 MMP3P08254 477 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 ITGB8P26012 769 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYNE2-226ENST00000557084 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
SYNE2-226ENST00000557084 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-226ENST00000557084 B4GALT4O60513 344 aa13.69□□□□□ -0.22
SYNE2-226ENST00000557084 RGS20O76081 388 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms