RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	CCL15	Q16663	113 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	CCDC152	Q4G0S7	254 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	KIAA0319	Q5VV43	1072 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	OGFOD2	Q6N063	350 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	C17orf99	Q6UX52	265 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	ANKRD18A	Q8IVF6	992 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	SYNGAP1	Q96PV0	1343 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	GSX1	Q9H4S2	264 aa	Predicted RBP	6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	LRRC4C	Q9HCJ2	640 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	EGFL7	Q9UHF1	273 aa		6.12	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZNF804B	A4D1E1	1349 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	MYO1B	O43795	1136 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	TFRC	P02786	760 aa	Known RBP	6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	NEFM	P07197	916 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	CETP	P11597	493 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	ASPA	P45381	313 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZNF211	Q13398	564 aa	Predicted RBP	6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	RASA3	Q14644	834 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	SPRED3	Q2MJR0	410 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	PHLDB3	Q6NSJ2	640 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZNF765	Q7L2R6	523 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	KIAA0825	Q8IV33	1275 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	TDH	Q8IZJ6	230 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	STK11IP	Q8N1F8	1099 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	RAET1E	Q8TD07	263 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZNF576	Q9H609	170 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	PAK6	Q9NQU5	681 aa	Predicted RBP	6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	FAM105A	Q9NUU6	356 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	BIN2	Q9UBW5	565 aa	Predicted RBP	6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	TSPYL4	Q9UJ04	414 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	MINPP1	Q9UNW1	487 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	SCN9A	Q15858	1988 aa		6.11	□□□□□ -1.43
SCFD1-223	ENST00000557076	COL1A1	P02452	1464 aa	Predicted RBP	6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	COL3A1	P02461	1466 aa	Predicted RBP	6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	RPTOR	Q8N122	1335 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	BTBD19	C9JJ37	291 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	PDE8A	O60658	829 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	ITPKA	P23677	461 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	CTGF	P29279	349 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	AP3B2	Q13367	1082 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	B4GALNT3	Q6L9W6	998 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	NECAB2	Q7Z6G3	386 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	CCDC82	Q8N4S0	544 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	POU5F2	Q8N7G0	328 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	ZNF428	Q96B54	188 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	PRMT6	Q96LA8	375 aa	Predicted RBP	6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	TRIM56	Q9BRZ2	755 aa	Known RBP	6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	ANO2	Q9NQ90	1003 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	BRPF3	Q9ULD4	1205 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	SLC5A6	Q9Y289	635 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	ANKRD36C	Q5JPF3	1778 aa		6.1	□□□□□ -1.43
SCFD1-223	ENST00000557076	NCOR1	O75376	2440 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	MED23	Q9ULK4	1368 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	CCT4	P50991	539 aa	Known RBP	6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	SNAPC2	Q13487	334 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	TNFAIP1	Q13829	316 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	PDE3A	Q14432	1141 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	NFE2L2	Q16236	605 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	CYP27C1	Q4G0S4	372 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	OGFOD3	Q6PK18	319 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	SEZ6L2	Q6UXD5	910 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	MISP3	Q96FF7	219 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	PAWR	Q96IZ0	340 aa	Known RBP	6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	GUCD1	Q96NT3	240 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	PLEKHF1	Q96S99	279 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	CDC5L	Q99459	802 aa	Known RBP	6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	EHD4	Q9H223	541 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	C1GALT1	Q9NS00	363 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	CSAD	Q9Y600	493 aa		6.09	□□□□□ -1.43
SCFD1-223	ENST00000557076	PIEZO1	Q92508	2521 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	KDM3B	Q7LBC6	1761 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	FAM205A	Q6ZU69	1335 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	ICMT	O60725	284 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	CPNE3	O75131	537 aa	Known RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	PCCA	P05165	728 aa	Predicted RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	PLA2G5	P39877	138 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	MAGEA10	P43363	369 aa	Predicted RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	FKBP1A	P62942	108 aa	Known RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	VGLL4	Q14135	290 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	COL19A1	Q14993	1142 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	CFAP100	Q494V2	611 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	ERO1B	Q86YB8	467 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	CCDC191	Q8NCU4	936 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	TEPSIN	Q96N21	525 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	WDR18	Q9BV38	432 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	PNN	Q9H307	717 aa	Known RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	CD209	Q9NNX6	404 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	HYPK	Q9NX55	129 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	DBF4	Q9UBU7	674 aa	Predicted RBP	6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	DAGLA	Q9Y4D2	1042 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	DNAH12	Q6ZR08	3092 aa		6.08	□□□□□ -1.44
SCFD1-223	ENST00000557076	TAF1	P21675	1872 aa		6.07	□□□□□ -1.44
SCFD1-223	ENST00000557076	MYPN	Q86TC9	1320 aa		6.07	□□□□□ -1.44
SCFD1-223	ENST00000557076	CLRN2	A0PK11	232 aa		6.07	□□□□□ -1.44
SCFD1-223	ENST00000557076	BIN1	O00499	593 aa		6.07	□□□□□ -1.44
SCFD1-223	ENST00000557076	CHL1	O00533	1208 aa		6.07	□□□□□ -1.44

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