RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 NCOA5Q9HCD5 579 aaKnown RBP26.29■■□□□ 1.8
TDP1-216ENST00000556867 STARD7Q9NQZ5 370 aa26.29■■□□□ 1.8
TDP1-216ENST00000556867 PRPF3O43395 683 aaKnown RBP26.28■■□□□ 1.8
TDP1-216ENST00000556867 ZEB2O60315 1214 aa26.28■■□□□ 1.8
TDP1-216ENST00000556867 RGS20O76081 388 aa26.28■■□□□ 1.8
TDP1-216ENST00000556867 SCG2P13521 617 aa26.28■■□□□ 1.8
TDP1-216ENST00000556867 GLT1D1Q96MS3 346 aa26.28■■□□□ 1.8
TDP1-216ENST00000556867 LARP6Q9BRS8 491 aaKnown RBP26.28■■□□□ 1.8
TDP1-216ENST00000556867 RNF26Q9BY78 433 aaPredicted RBP26.28■■□□□ 1.8
TDP1-216ENST00000556867 ELP1O95163 1332 aa26.28■■□□□ 1.8
TDP1-216ENST00000556867 TRIM60Q495X7 471 aa26.27■■□□□ 1.8
TDP1-216ENST00000556867 COPS5Q92905 334 aa26.27■■□□□ 1.8
TDP1-216ENST00000556867 PHKBQ93100 1093 aa26.27■■□□□ 1.8
TDP1-216ENST00000556867 RIC8AQ9NPQ8 531 aa26.27■■□□□ 1.8
TDP1-216ENST00000556867 STAM2O75886 525 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 CABYRO75952 493 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 CPT1AP50416 773 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 ANKRD1Q15327 319 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 PKN1Q16512 942 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 UBE2SQ16763 222 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 XRRA1Q6P2D8 792 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 ATP11BQ9Y2G3 1177 aa26.26■■□□□ 1.79
TDP1-216ENST00000556867 ADCY7P51828 1080 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 AK2P54819 239 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 MRPS9P82933 396 aaKnown RBP26.25■■□□□ 1.79
TDP1-216ENST00000556867 AKAP17AQ02040 695 aaKnown RBP26.25■■□□□ 1.79
TDP1-216ENST00000556867 LY6KQ17RY6 165 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 PCNX4Q63HM2 1172 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 KCNV1Q6PIU1 500 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 CXCL17Q6UXB2 119 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 GLT8D2Q9H1C3 349 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 DDX41Q9UJV9 622 aaKnown RBP26.25■■□□□ 1.79
TDP1-216ENST00000556867 ZMYND8Q9ULU4 1186 aaPredicted RBP26.25■■□□□ 1.79
TDP1-216ENST00000556867 MRVI1Q9Y6F6 885 aa26.25■■□□□ 1.79
TDP1-216ENST00000556867 GH1P01241 217 aa26.24■■□□□ 1.79
TDP1-216ENST00000556867 ARHGAP1Q07960 439 aa26.24■■□□□ 1.79
TDP1-216ENST00000556867 BRDTQ58F21 947 aaPredicted RBP26.24■■□□□ 1.79
TDP1-216ENST00000556867 INPP4AQ96PE3 977 aaPredicted RBP26.24■■□□□ 1.79
TDP1-216ENST00000556867 SLC26A6Q9BXS9 759 aa26.24■■□□□ 1.79
TDP1-216ENST00000556867 TPCN1Q9ULQ1 816 aa26.24■■□□□ 1.79
TDP1-216ENST00000556867 A0A0U1RQG5 324 aaPredicted RBP26.23■■□□□ 1.79
TDP1-216ENST00000556867 ESYT2A0FGR8 921 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 SMCO2A6NFE2 343 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 A6NJR5 290 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 SPDYE3A6NKU9 549 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 CPLX1O14810 134 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 STK3Q13188 491 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 CCDC12Q8WUD4 166 aaPredicted RBP26.23■■□□□ 1.79
TDP1-216ENST00000556867 EMID1Q96A84 441 aaPredicted RBP26.23■■□□□ 1.79
TDP1-216ENST00000556867 POLR3EQ9NVU0 708 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 PCDHA6Q9UN73 950 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 PCDHA8Q9Y5H6 950 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 MYH7BA7E2Y1 1941 aa26.23■■□□□ 1.79
TDP1-216ENST00000556867 TGFB3P10600 412 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 TLE2Q04725 743 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 GNPTABQ3T906 1256 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 CPLX2Q6PUV4 134 aaKnown RBP26.22■■□□□ 1.79
TDP1-216ENST00000556867 ANKRD33Q7Z3H0 272 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 TRIM22Q8IYM9 498 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 ZFP91Q96JP5 570 aaPredicted RBP26.22■■□□□ 1.79
TDP1-216ENST00000556867 SCN10AQ9Y5Y9 1956 aa26.22■■□□□ 1.79
TDP1-216ENST00000556867 FOSP01100 380 aaPredicted RBP26.21■■□□□ 1.79
TDP1-216ENST00000556867 SYN1P17600 705 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 ICAM3P32942 547 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 CDK7P50613 346 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 NEK4P51957 841 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 PURAQ00577 322 aaKnown RBP26.21■■□□□ 1.79
TDP1-216ENST00000556867 VTI1AQ96AJ9 217 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 TOX2Q96NM4 488 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 ZMYND12Q9H0C1 365 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 SLKQ9H2G2 1235 aaPredicted RBP26.21■■□□□ 1.79
TDP1-216ENST00000556867 EHMT1Q9H9B1 1298 aa26.21■■□□□ 1.79
TDP1-216ENST00000556867 MROH7Q68CQ1 1323 aa26.2■■□□□ 1.79
TDP1-216ENST00000556867 ARVCFO00192 962 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 KPNA6O60684 536 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 PFKFB2O60825 505 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 PPFIA3O75145 1194 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 CLK2P49760 499 aaKnown RBP26.2■■□□□ 1.78
TDP1-216ENST00000556867 SSRP1Q08945 709 aaKnown RBP26.2■■□□□ 1.78
TDP1-216ENST00000556867 SCRN1Q12765 414 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 AP3B2Q13367 1082 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 SLC43A3Q8NBI5 491 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 AFG1LQ8WV93 481 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 PDLIM7Q9NR12 457 aa26.2■■□□□ 1.78
TDP1-216ENST00000556867 LTBP2Q14767 1821 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 FIBPO43427 364 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 PQBP1O60828 265 aaKnown RBP26.19■■□□□ 1.78
TDP1-216ENST00000556867 MYL3P08590 195 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 UBA1P22314 1058 aaKnown RBP26.19■■□□□ 1.78
TDP1-216ENST00000556867 LAMC2Q13753 1193 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 CCDC148Q8NFR7 591 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 SEZ6LQ9BYH1 1024 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 RTEL1Q9NZ71 1219 aa26.19■■□□□ 1.78
TDP1-216ENST00000556867 SPATA31C2B4DYI2 1134 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 CDKL5O76039 1030 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 MMP3P08254 477 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 SEMA3FQ13275 785 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 ITGA7Q13683 1181 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 CELF3Q5SZQ8 465 aaKnown RBP26.18■■□□□ 1.78
TDP1-216ENST00000556867 CHRDL2Q6WN34 429 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms