RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 TCTN1Q2MV58 587 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 MFSD5Q6N075 450 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 CCDC62Q6P9F0 684 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 USP17L6PQ6QN14 398 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 OTOP2Q7RTS6 562 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 SPRED2Q7Z698 418 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 ZNF654Q8IZM8 581 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 WNT8BQ93098 351 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 PGBD1Q96JS3 809 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 ALG1Q9BT22 464 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 NOC4LQ9BVI4 516 aaKnown RBP7.37□□□□□ -1.23
LGMN-213ENST00000556790 AMNQ9BXJ7 453 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 OSBPL7Q9BZF2 842 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 ALDH8A1Q9H2A2 487 aaPredicted RBP7.37□□□□□ -1.23
LGMN-213ENST00000556790 HIPK3Q9H422 1215 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 RIOX1Q9H6W3 641 aa7.37□□□□□ -1.23
LGMN-213ENST00000556790 ERICH2A1L162 156 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 NR3C2P08235 984 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 MMP3P08254 477 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 NKX3-2P78367 333 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 MRPS9P82933 396 aaKnown RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 SP4Q02446 784 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 SEMA3FQ13275 785 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 PGM5Q15124 567 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 CCDC178Q5BJE1 867 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 GDF6Q6KF10 455 aaPredicted RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 CENPQQ7L2Z9 268 aaPredicted RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 CATIPQ7Z7H3 387 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 DNERQ8NFT8 737 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 SCFD2Q8WU76 684 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 KAT2BQ92831 832 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 TOX2Q96NM4 488 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 CTAGE1Q96RT6 745 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 CDX2Q99626 313 aaPredicted RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 PDCD2LQ9BRP1 358 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 LARP6Q9BRS8 491 aaKnown RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 SEMA6BQ9H3T3 888 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 PRDM6Q9NQX0 595 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 PKD2L1Q9P0L9 805 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 DDX41Q9UJV9 622 aaKnown RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 MRPL11Q9Y3B7 192 aaKnown RBP7.36□□□□□ -1.23
LGMN-213ENST00000556790 TANC1Q9C0D5 1861 aa7.36□□□□□ -1.23
LGMN-213ENST00000556790 A6NJR5 290 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 RFXAPO00287 272 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 ARHGEF15O94989 841 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 DNAJB2P25686 324 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 CPT1AP50416 773 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 TTLL4Q14679 1199 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 STXBP2Q15833 593 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 HSDL1Q3SXM5 330 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 ZNF697Q5TEC3 545 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 TYW1BQ6NUM6 668 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 CASC1Q6TDU7 716 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 MICU3Q86XE3 530 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 USP38Q8NB14 1042 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 SLC17A8Q8NDX2 589 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 NSUN6Q8TEA1 469 aaKnown RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 PPM1EQ8WY54 764 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 DHX38Q92620 1227 aaKnown RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 ZBTB10Q96DT7 871 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 MTG1Q9BT17 334 aaPredicted RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 PBX4Q9BYU1 374 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 NKX2-4Q9H2Z4 354 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 CERS4Q9HA82 394 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 NAP1L2Q9ULW6 460 aaPredicted RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 YBX2Q9Y2T7 364 aaKnown RBP7.35□□□□□ -1.23
LGMN-213ENST00000556790 MRVI1Q9Y6F6 885 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 MYO9BQ13459 2157 aa7.35□□□□□ -1.23
LGMN-213ENST00000556790 PNMA6FA0A0J9YX94 578 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 CCDC69A6NI79 296 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 GCOM1H8Y6P7 765 aaPredicted RBP7.34□□□□□ -1.23
LGMN-213ENST00000556790 MEIS2O14770 477 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 ZEB2O60315 1214 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 GGPS1O95749 300 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 GH1P01241 217 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 POLR2MP0CAP2 368 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 UBA1P22314 1058 aaKnown RBP7.34□□□□□ -1.23
LGMN-213ENST00000556790 CDC27P30260 824 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 MCM5P33992 734 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 GPNMBQ14956 572 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 BMP2KLQ5H9B9 411 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 DHX37Q8IY37 1157 aaKnown RBP7.34□□□□□ -1.23
LGMN-213ENST00000556790 TMEM199Q8N511 208 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 RGS22Q8NE09 1264 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 CCDC136Q96JN2 1154 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 IL23AQ9NPF7 189 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 TMEM260Q9NX78 707 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 HDAC6Q9UBN7 1215 aa7.34□□□□□ -1.23
LGMN-213ENST00000556790 Q9Y3F1 56 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms