RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KIF2CQ99661 725 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 PCDHA6Q9UN73 950 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 PHF24Q9UPV7 400 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 PCDHA8Q9Y5H6 950 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
PSEN1-217ENST00000556533 CDKL5O76039 1030 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 ARIH2O95376 493 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 ME3Q16798 604 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 LRRC26Q2I0M4 334 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 C7orf61Q8IZ16 206 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 PCSK9Q8NBP7 692 aaKnown RBP19.6■□□□□ 0.73
PSEN1-217ENST00000556533 CCDC12Q8WUD4 166 aaPredicted RBP19.6■□□□□ 0.73
PSEN1-217ENST00000556533 TSEN34Q9BSV6 310 aaKnown RBP19.6■□□□□ 0.73
PSEN1-217ENST00000556533 C6orf50Q9HD87 102 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 TMEM260Q9NX78 707 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 VPS54Q9P1Q0 977 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 Q9Y3F1 56 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 LCTP09848 1927 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 MYH6P13533 1939 aa19.6■□□□□ 0.73
PSEN1-217ENST00000556533 A0A1W2PQ45 241 aaPredicted RBP19.59■□□□□ 0.73
PSEN1-217ENST00000556533 A0A1W2PQY0 241 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 TNRC18O15417 2968 aaPredicted RBP19.59■□□□□ 0.73
PSEN1-217ENST00000556533 SORBS3O60504 671 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 LARGE1O95461 756 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 ASGR1P07306 291 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 PGBD1Q96JS3 809 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 GLT8D2Q9H1C3 349 aa19.59■□□□□ 0.73
PSEN1-217ENST00000556533 MCM3APO60318 1980 aa19.58■□□□□ 0.73
PSEN1-217ENST00000556533 NKRFO15226 690 aaKnown RBP eCLIP19.58■□□□□ 0.72
PSEN1-217ENST00000556533 CTAGE5O15320 804 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 ZEB2O60315 1214 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 DEXIO95424 95 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 NLRP5P59047 1200 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 MRPS9P82933 396 aaKnown RBP19.58■□□□□ 0.72
PSEN1-217ENST00000556533 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 CCSAPQ6IQ19 270 aaPredicted RBP19.58■□□□□ 0.72
PSEN1-217ENST00000556533 CCDC62Q6P9F0 684 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 SLC39A5Q6ZMH5 540 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 DDX41Q9UJV9 622 aaKnown RBP19.58■□□□□ 0.72
PSEN1-217ENST00000556533 LIMCH1Q9UPQ0 1083 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 ATP11BQ9Y2G3 1177 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
PSEN1-217ENST00000556533 MOXD2PA6NHM9 499 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 RGS20O76081 388 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 GH1P01241 217 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 MYL3P08590 195 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 CST5P28325 142 aaPredicted RBP19.57■□□□□ 0.72
PSEN1-217ENST00000556533 BRDTQ58F21 947 aaPredicted RBP19.57■□□□□ 0.72
PSEN1-217ENST00000556533 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 GLT1D1Q96MS3 346 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 AIFM3Q96NN9 605 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 STARD7Q9NQZ5 370 aa19.57■□□□□ 0.72
PSEN1-217ENST00000556533 FRMPD4Q14CM0 1322 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 H0YGN5 161 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 ADAMTS3O15072 1205 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 FOSP01100 380 aaPredicted RBP19.56■□□□□ 0.72
PSEN1-217ENST00000556533 GNA11P29992 359 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 CPT1AP50416 773 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 RTP1P59025 263 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 RABEP1Q15276 862 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 GNPTABQ3T906 1256 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 XRRA1Q6P2D8 792 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 CXCL17Q6UXB2 119 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 CCDC148Q8NFR7 591 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 GTF3C6Q969F1 213 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 ZMYND12Q9H0C1 365 aa19.56■□□□□ 0.72
PSEN1-217ENST00000556533 MKI67P46013 3256 aaKnown RBP19.56■□□□□ 0.72
PSEN1-217ENST00000556533 STAM2O75886 525 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 CTDNEP1O95476 244 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 NKX3-2P78367 333 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 KCNV1Q6PIU1 500 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 NLRX1Q86UT6 975 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
PSEN1-217ENST00000556533 REXO1Q8N1G1 1221 aaKnown RBP19.55■□□□□ 0.72
PSEN1-217ENST00000556533 AFG1LQ8WV93 481 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
PSEN1-217ENST00000556533 ORC3Q9UBD5 711 aaPredicted RBP19.55■□□□□ 0.72
PSEN1-217ENST00000556533 ESYT2A0FGR8 921 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 CHMP4BP1P59074 171 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 SP2Q02086 613 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 ARHGAP1Q07960 439 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 TRIM60Q495X7 471 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 RASGRP4Q8TDF6 673 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 TBC1D32Q96NH3 1257 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 INPP4AQ96PE3 977 aaPredicted RBP19.54■□□□□ 0.72
PSEN1-217ENST00000556533 MLXIPQ9HAP2 919 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 SH3GLB2Q9NR46 395 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 ZMYND8Q9ULU4 1186 aaPredicted RBP19.54■□□□□ 0.72
PSEN1-217ENST00000556533 LRRC37A2A6NM11 1700 aa19.54■□□□□ 0.72
PSEN1-217ENST00000556533 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 GGPS1O95749 300 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 TGFB3P10600 412 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 SYN1P17600 705 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 ZNF76P36508 570 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 CLK2P49760 499 aaKnown RBP19.53■□□□□ 0.72
PSEN1-217ENST00000556533 PSMC6P62333 389 aa19.53■□□□□ 0.72
PSEN1-217ENST00000556533 AP3B2Q13367 1082 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms