RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MTHFD1LQ6UB35 978 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 FCHSD1Q86WN1 690 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 CDKL2Q92772 493 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 CEP95Q96GE4 821 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 TMEM87BQ96K49 555 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 CNTNAP3BQ96NU0 1288 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 CTAGE1Q96RT6 745 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 EIF2AQ9BY44 585 aaKnown RBP6.9□□□□□ -1.3
TDP1-215ENST00000556498 CNTNAP3Q9BZ76 1288 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 NACAP1Q9BZK3 213 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 UBE2OQ9C0C9 1292 aaKnown RBP6.9□□□□□ -1.3
TDP1-215ENST00000556498 PARVGQ9HBI0 331 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 TCP11L1Q9NUJ3 509 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 KCTD5Q9NXV2 234 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 EPS15L1Q9UBC2 864 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 LCMT1Q9UIC8 334 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 GGA1Q9UJY5 639 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 ZNF510Q9Y2H8 683 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 DAAM1Q9Y4D1 1078 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 SPO11Q9Y5K1 396 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 AK5Q9Y6K8 562 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 GAKO14976 1311 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 MAPK8IP3Q9UPT6 1336 aa6.9□□□□□ -1.3
TDP1-215ENST00000556498 MAP3K5Q99683 1374 aa6.9□□□□□ -1.31
TDP1-215ENST00000556498 A0A1W2PP55 124 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 J3QW42 95 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 NDUFAB1O14561 156 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 LSM1O15116 133 aaKnown RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 POLR3GO15318 223 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 FIBPO43427 364 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 SNX2O60749 519 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 SKAP2O75563 359 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 PENKP01210 267 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 S100A6P06703 90 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 BLVRAP53004 296 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 DR1Q01658 176 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 MLLT1Q03111 559 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 DMPKQ09013 629 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 CUL3Q13618 768 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 SIM2Q14190 667 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 ACAP1Q15027 740 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 TCEAL1Q15170 157 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 SPECC1Q5M775 1068 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 HFE2Q6ZVN8 426 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 SNX32Q86XE0 403 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 ESX1Q8N693 406 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 OR8K1Q8NGG5 319 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 PARD3BQ8TEW8 1205 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 ARHGEF2Q92974 986 aaKnown RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 TBC1D20Q96BZ9 403 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 CABS1Q96KC9 395 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 OSBPL7Q9BZF2 842 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 TRIM8Q9BZR9 551 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 NSRP1Q9H0G5 558 aaKnown RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 LGR6Q9HBX8 967 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 AIPL1Q9NZN9 384 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 TUBGCP4Q9UGJ1 667 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 CIDEBQ9UHD4 219 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 GDF2Q9UK05 429 aaPredicted RBP6.89□□□□□ -1.31
TDP1-215ENST00000556498 PCDHGB3Q9Y5G1 929 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 PPP2R3BQ9Y5P8 575 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 TMEM94Q12767 1356 aa6.89□□□□□ -1.31
TDP1-215ENST00000556498 ARHGAP31Q2M1Z3 1444 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 ERICH2A1L162 156 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SPDYE3A6NKU9 549 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 CASQ2O14958 399 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 SORBS3O60504 671 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 TSPAN1O60635 241 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 RAPGEF3O95398 923 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ADAMTS2O95450 1211 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 GYS1P13807 737 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 EZRP15311 586 aaKnown RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 ADH7P40394 386 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 NLRP12P59046 1061 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SCRN1Q12765 414 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SNX1Q13596 522 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SEPT6Q14141 434 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ARMC4Q5T2S8 1044 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 LMBRD2Q68DH5 695 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 ZNF449Q6P9G9 518 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 NANOGNBQ7Z5D8 188 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms