RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ABHD16BQ9H3Z7 469 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 MAP3K20Q9NYL2 800 aaKnown RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 ADD3Q9UEY8 706 aaKnown RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.62
SRP54-210ENST00000556380 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
SRP54-210ENST00000556380 LCTP09848 1927 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 ADCY6O43306 1168 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 MSCO60682 206 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 CFBP00751 764 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 IFNAR1P17181 557 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 AK2P54819 239 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 PKN1Q16512 942 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
SRP54-210ENST00000556380 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
SRP54-210ENST00000556380 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
SRP54-210ENST00000556380 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 PLXNA1Q9UIW2 1896 aa11.14□□□□□ -0.63
SRP54-210ENST00000556380 RBM47A0AV96 593 aaKnown RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 MEIS2O14770 477 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 PFKFB2O60825 505 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 CNGA1P29973 690 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 HOXA13P31271 388 aaPredicted RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 NEK4P51957 841 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 RMDN3Q96TC7 470 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 BACH2Q9BYV9 841 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 ZHX1Q9UKY1 873 aaPredicted RBP11.13□□□□□ -0.63
SRP54-210ENST00000556380 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
SRP54-210ENST00000556380 STXBP3O00186 592 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 COL6A1P12109 1028 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 AKR1A1P14550 325 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 COL9A1P20849 921 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 NKX3-2P78367 333 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 SCRN1Q12765 414 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 ANKRD1Q15327 319 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
SRP54-210ENST00000556380 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 VSIG10LQ86VR7 867 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
SRP54-210ENST00000556380 PHKBQ93100 1093 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 LENG1Q96BZ8 264 aaPredicted RBP11.12□□□□□ -0.63
SRP54-210ENST00000556380 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 PSTPIP2Q9H939 334 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 PXMP2Q9NR77 195 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
SRP54-210ENST00000556380 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
SRP54-210ENST00000556380 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 MCM3APO60318 1980 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 CTAGE5O15320 804 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 FARP2O94887 1054 aaPredicted RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 NR3C2P08235 984 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 RARBP10826 455 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 SCG2P13521 617 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 SMPD1P17405 629 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 PTPN5P54829 565 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 ME3Q16798 604 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 IL31RAQ8NI17 732 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 PAWRQ96IZ0 340 aaKnown RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
SRP54-210ENST00000556380 DNAH12Q6ZR08 3092 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 MYH6P13533 1939 aa11.11□□□□□ -0.63
SRP54-210ENST00000556380 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 B4DLN1 442 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 hCG_1984214I3L0E3 225 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 ADAMTS3O15072 1205 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 RGS20O76081 388 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 LARGE1O95461 756 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 EIF2AK2P19525 551 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms