RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 DNAJC25Q9H1X3 360 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 CHRDQ9H2X0 955 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ATXN3-239ENST00000556315 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 SOX13Q9UN79 622 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
ATXN3-239ENST00000556315 HIF3AQ9Y2N7 669 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 AOX1Q06278 1338 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 SNAP23O00161 211 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 PDE2AO00408 941 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-239ENST00000556315 PAX4O43316 350 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-239ENST00000556315 BMP3P12645 472 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 GNAI1P63096 354 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
ATXN3-239ENST00000556315 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 DSC3Q14574 896 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 RALBP1Q15311 655 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 BEND4Q6ZU67 534 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 NPAS4Q8IUM7 802 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 TMEM102Q8N9M5 508 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-239ENST00000556315 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 TMEM39BQ9GZU3 492 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 SNCAIPQ9Y6H5 919 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 TAF1P21675 1872 aa6.13□□□□□ -1.43
ATXN3-239ENST00000556315 PDHXO00330 501 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 SART1O43290 800 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 CPNE3O75131 537 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 CRKP46108 304 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 LAMB2P55268 1798 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 FCGRTP55899 365 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 ATP2B2Q01814 1243 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 GCKRQ14397 625 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 CWF19L2Q2TBE0 894 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 C8orf58Q8NAV2 365 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 HHIPQ96QV1 700 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 RUSC1Q9BVN2 902 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-239ENST00000556315 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
ATXN3-239ENST00000556315 ADCY3O60266 1144 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 TAL1P17542 331 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-239ENST00000556315 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
ATXN3-239ENST00000556315 MAPK8P45983 427 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 CASP7P55210 303 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 NLRP12P59046 1061 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 PRKCZQ05513 592 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 HGSNATQ68CP4 663 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-239ENST00000556315 RGS22Q8NE09 1264 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 NXPE3Q969Y0 559 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
ATXN3-239ENST00000556315 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
ATXN3-239ENST00000556315 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 HTTP42858 3142 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
ATXN3-239ENST00000556315 EIF1AYO14602 144 aaKnown RBP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 CXCL11O14625 94 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 PLIN1O60240 522 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 P4HBP07237 508 aaKnown RBP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 TXKP42681 527 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 ARL4DP49703 201 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 FLT3LGP49771 235 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 C19orf57Q0VDD7 668 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 ORC1Q13415 861 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
ATXN3-239ENST00000556315 ALG1LQ6GMV1 187 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 LDHAL6AQ6ZMR3 332 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 Q7L0L9 218 aa6.1□□□□□ -1.43
ATXN3-239ENST00000556315 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms