RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TRIML1Q8N9V2 468 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 CNNM3Q8NE01 707 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 DCAF4Q8WV16 495 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 FAM151AQ8WW52 585 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 ZBED3Q96IU2 234 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 TDRD3Q9H7E2 651 aaKnown RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 TMOD2Q9NZR1 351 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 PCDHAC2Q9Y5I4 1007 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 CD2APQ9Y5K6 639 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 SMCO2A6NFE2 343 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 PSMD14O00487 310 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 IKBKBO14920 756 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 POLR2DO15514 142 aaKnown RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 AP5Z1O43299 807 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 SLFN14P0C7P3 912 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF75DP51815 510 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 NAPAP54920 295 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 MAP3K10Q02779 954 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 GRIN1Q05586 938 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 TCP10Q12799 353 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 CBLBQ13191 982 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 DLGAP5Q15398 846 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 NOM1Q5C9Z4 860 aaKnown RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 PLA2G4DQ86XP0 818 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 SIAH1Q8IUQ4 282 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 DHX40Q8IX18 779 aaKnown RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 GMCL1P1Q8NEA9 526 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 PIGSQ96S52 555 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 GLT8D2Q9H1C3 349 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 JMJD4Q9H9V9 463 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF277Q9NRM2 450 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-235ENST00000556082 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
ATXN3-235ENST00000556082 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 BECN2A8MW95 431 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 MPHOSPH10O00566 681 aaKnown RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 ADAMTS3O15072 1205 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 RAD17O75943 681 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 SMC2O95347 1197 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 EEF2P13639 858 aaKnown RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 CACNB3P54284 484 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 SEMA3FQ13275 785 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 TNIP1Q15025 636 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 POSTNQ15063 836 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 ZSCAN29Q8IWY8 852 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 ADGRF4Q8IZF3 695 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 MRFAP1L1Q96HT8 127 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 UBA5Q9GZZ9 404 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 RRAGDQ9NQL2 400 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF70Q9UC06 446 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-235ENST00000556082 PCDHA5Q9Y5H7 936 aa9.41□□□□□ -0.9
ATXN3-235ENST00000556082 GOLGA6L6A8MZA4 724 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 ZBTB5O15062 677 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF500O60304 480 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 RPS12P25398 132 aaKnown RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 MCM7P33993 719 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 PTSQ03393 145 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 CXCL9Q07325 125 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 MORC3Q14149 939 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 IL17AQ16552 155 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 DPCR1Q3MIW9 517 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 SLFN13Q68D06 897 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 BTNL9Q6UXG8 535 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 DTHD1Q6ZMT9 781 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 USP49Q70CQ1 688 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 IQUBQ8NA54 791 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 EPSTI1Q96J88 318 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 AK8Q96MA6 479 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 CCSER1Q9C0I3 900 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 VAT1LQ9HCJ6 419 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-235ENST00000556082 RIC8AQ9NPQ8 531 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 PGAP2Q9UHJ9 254 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 MYH6P13533 1939 aa9.4□□□□□ -0.9
ATXN3-235ENST00000556082 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-235ENST00000556082 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
ATXN3-235ENST00000556082 F5H6K3 240 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms