RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 ZNF365Q70YC5 407 aa18.74■□□□□ 0.59
CHGA-204ENST00000556076 CCDC82Q8N4S0 544 aa18.74■□□□□ 0.59
CHGA-204ENST00000556076 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
CHGA-204ENST00000556076 IWS1Q96ST2 819 aa18.74■□□□□ 0.59
CHGA-204ENST00000556076 TTYH1Q9H313 450 aaPredicted RBP18.74■□□□□ 0.59
CHGA-204ENST00000556076 BCAS3Q9H6U6 928 aa18.74■□□□□ 0.59
CHGA-204ENST00000556076 PRUNE2Q8WUY3 3088 aa18.74■□□□□ 0.59
CHGA-204ENST00000556076 NKRFO15226 690 aaKnown RBP eCLIP18.73■□□□□ 0.59
CHGA-204ENST00000556076 GH1P01241 217 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 MMP3P08254 477 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 GHRHRQ02643 423 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 PGM5Q15124 567 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 TMEM199Q8N511 208 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 VWCEQ96DN2 955 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 DDX41Q9UJV9 622 aaKnown RBP18.73■□□□□ 0.59
CHGA-204ENST00000556076 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 UNC80Q8N2C7 3258 aa18.73■□□□□ 0.59
CHGA-204ENST00000556076 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 GCOM1H8Y6P7 765 aaPredicted RBP18.72■□□□□ 0.59
CHGA-204ENST00000556076 EIF3JO75822 258 aaKnown RBP18.72■□□□□ 0.59
CHGA-204ENST00000556076 DDAH1O94760 285 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 CPA1P15085 419 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 SP2Q02086 613 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 PPIGQ13427 754 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHGA-204ENST00000556076 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
CHGA-204ENST00000556076 KAT2BQ92831 832 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
CHGA-204ENST00000556076 CXXC1Q9P0U4 656 aaPredicted RBP18.72■□□□□ 0.59
CHGA-204ENST00000556076 GBF1Q92538 1859 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 CDC45O75419 566 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 ZNF286BP0CG31 522 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 PBX2P40425 430 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 SMAD3P84022 425 aaKnown RBP18.71■□□□□ 0.59
CHGA-204ENST00000556076 ZNF697Q5TEC3 545 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 VSIG10LQ86VR7 867 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 RRP36Q96EU6 259 aaKnown RBP18.71■□□□□ 0.59
CHGA-204ENST00000556076 TMEM87BQ96K49 555 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 SPZ1Q9BXG8 430 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 MAF1Q9H063 256 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 SEMA6BQ9H3T3 888 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 IL23AQ9NPF7 189 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 CHD7Q9P2D1 2997 aa18.71■□□□□ 0.59
CHGA-204ENST00000556076 TRIP12Q14669 1992 aaPredicted RBP18.7■□□□□ 0.58
CHGA-204ENST00000556076 BRDTQ58F21 947 aaPredicted RBP18.7■□□□□ 0.58
CHGA-204ENST00000556076 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
CHGA-204ENST00000556076 MICU3Q86XE3 530 aa18.7■□□□□ 0.58
CHGA-204ENST00000556076 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
CHGA-204ENST00000556076 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
CHGA-204ENST00000556076 TELO2Q9Y4R8 837 aa18.7■□□□□ 0.58
CHGA-204ENST00000556076 KIF5BP33176 963 aa18.69■□□□□ 0.58
CHGA-204ENST00000556076 MRPS9P82933 396 aaKnown RBP18.69■□□□□ 0.58
CHGA-204ENST00000556076 CTAGE1Q96RT6 745 aa18.69■□□□□ 0.58
CHGA-204ENST00000556076 MAP3K14Q99558 947 aa18.69■□□□□ 0.58
CHGA-204ENST00000556076 CDX2Q99626 313 aaPredicted RBP18.69■□□□□ 0.58
CHGA-204ENST00000556076 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
CHGA-204ENST00000556076 RTEL1Q9NZ71 1219 aa18.69■□□□□ 0.58
CHGA-204ENST00000556076 GGPS1O95749 300 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 DNAJB2P25686 324 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 CCND2P30279 289 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 LIFRP42702 1097 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 UBE2SQ16763 222 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 GDF6Q6KF10 455 aaPredicted RBP18.68■□□□□ 0.58
CHGA-204ENST00000556076 DEFB128Q7Z7B8 93 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
CHGA-204ENST00000556076 MYLIPQ8WY64 445 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 NEK1Q96PY6 1258 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 SLC12A7Q9Y666 1083 aa18.68■□□□□ 0.58
CHGA-204ENST00000556076 TET1Q8NFU7 2136 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 MEIS2O14770 477 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 KPNA6O60684 536 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 UBA1P22314 1058 aaKnown RBP18.67■□□□□ 0.58
CHGA-204ENST00000556076 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
CHGA-204ENST00000556076 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 HIC1Q14526 733 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 HSDL1Q3SXM5 330 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 MYSM1Q5VVJ2 828 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 ERICH6BQ5W0A0 696 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 NFRKBQ6P4R8 1299 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
CHGA-204ENST00000556076 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 TMTC3Q6ZXV5 915 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 SLC17A8Q8NDX2 589 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 TANC1Q9C0D5 1861 aa18.67■□□□□ 0.58
CHGA-204ENST00000556076 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.66■□□□□ 0.58
CHGA-204ENST00000556076 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.66■□□□□ 0.58
CHGA-204ENST00000556076 FGBP02675 491 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 PSEN2P49810 448 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 ZNF200P98182 395 aaPredicted RBP18.66■□□□□ 0.58
CHGA-204ENST00000556076 PTGISQ16647 500 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 DGKDQ16760 1214 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 CELF3Q5SZQ8 465 aaKnown RBP18.66■□□□□ 0.58
CHGA-204ENST00000556076 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
CHGA-204ENST00000556076 PPTC7Q8NI37 304 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms