RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	KDM4A	O75164	1064 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	FOSL2	P15408	326 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CCL23	P55773	120 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PPIG	Q13427	754 aa	Known RBP eCLIP	10.39	□□□□□ -0.75	1e-9	■□□□□ 9.6
HNRNPC-222	ENST00000555914	RNF207	Q6ZRF8	634 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TMEM199	Q8N511	208 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	FAM184A	Q8NB25	1140 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	RUFY2	Q8WXA3	655 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ESR2	Q92731	530 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	COPS5	Q92905	334 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	KCNB2	Q92953	911 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	VWCE	Q96DN2	955 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	HIPK3	Q9H422	1215 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914		Q9Y3F1	56 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914	LAMA4	Q16363	1823 aa		10.39	□□□□□ -0.75
HNRNPC-222	ENST00000555914		B4E1Z4	1266 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	HMGN5	P82970	282 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PURA	Q00577	322 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	DGKH	Q86XP1	1220 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PNMA1	Q8ND90	353 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SCLY	Q96I15	445 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TM6SF1	Q9BZW5	370 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	WNT8A	Q9H1J5	351 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	RNF41	Q9H4P4	317 aa	Predicted RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZNF576	Q9H609	170 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TRMT13	Q9NUP7	481 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ADD3	Q9UEY8	706 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZKSCAN5	Q9Y2L8	839 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SNX14	Q9Y5W7	946 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	GBF1	Q92538	1859 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	RBM47	A0AV96	593 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZEB2	O60315	1214 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CABYR	O75952	493 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	LETM1	O95202	739 aa	Predicted RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ARIH2	O95376	493 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PC	P11498	1178 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	EDNRB	P24530	442 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	UVSSA	Q2YD98	709 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SASS6	Q6UVJ0	657 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	OTOP2	Q7RTS6	562 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ADGRF4	Q8IZF3	695 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ENAH	Q8N8S7	591 aa	Predicted RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	USP38	Q8NB14	1042 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TIFA	Q96CG3	184 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	NOC4L	Q9BVI4	516 aa	Known RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	IL23A	Q9NPF7	189 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZSWIM5	Q9P217	1185 aa		10.38	□□□□□ -0.75
HNRNPC-222	ENST00000555914	WDR19	Q8NEZ3	1342 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SCN5A	Q14524	2016 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SCN10A	Q9Y5Y9	1956 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TMEM265	A0A087WTH1	108 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TPM3	P06753	285 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	MYL3	P08590	195 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CYP2C9	P11712	490 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CDC37	Q16543	378 aa	Predicted RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	GPATCH4	Q5T3I0	446 aa	Known RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	OR6J1	Q8NGC5	347 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	UPF3B	Q9BZI7	483 aa	Known RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	DIAPH3	Q9NSV4	1193 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	COL20A1	Q9P218	1284 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	MYH6	P13533	1939 aa		10.37	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TNKS	O95271	1327 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	HIP1	O00291	1037 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CHRM1	P11229	460 aa	Predicted RBP	10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PDE4D	Q08499	809 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	IQCA1	Q86XH1	822 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TEX2	Q8IWB9	1127 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	STAG2	Q8N3U4	1231 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	DNER	Q8NFT8	737 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	HERVK_113	Q902F9	699 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TAAR1	Q96RJ0	339 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	DSCC1	Q9BVC3	393 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	KAT14	Q9H8E8	782 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	VAT1L	Q9HCJ6	419 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	LIMCH1	Q9UPQ0	1083 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TET1	Q8NFU7	2136 aa		10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.36	□□□□□ -0.75
HNRNPC-222	ENST00000555914	LOC102724159	A0A0B4J2E5	919 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SYCE3	A1L190	88 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	FGB	P02675	491 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	TXN	P10599	105 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	CPT1A	P50416	773 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PPP2R5B	Q15173	497 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PWP2	Q15269	919 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	QRICH1	Q2TAL8	776 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	NBPF20	Q3BBV1	942 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	DHX37	Q8IY37	1157 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	ANKS1A	Q92625	1134 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PRIMPOL	Q96LW4	560 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PRDM12	Q9H4Q4	367 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	JMJD4	Q9H9V9	463 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	PRDM6	Q9NQX0	595 aa		10.35	□□□□□ -0.75
HNRNPC-222	ENST00000555914	YBX2	Q9Y2T7	364 aa	Known RBP	10.35	□□□□□ -0.75

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