RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 MYH15Q9Y2K3 1946 aa7.89□□□□□ -1.15
SLIRP-204ENST00000555890 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 MROH7-TTC4A0A0A0MT08 1334 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 CCDC196A0A1B0GTZ2 297 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 USP2O75604 605 aaPredicted RBP7.88□□□□□ -1.15
SLIRP-204ENST00000555890 ABL1P00519 1130 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 SCNN1AP37088 669 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 MMP16P51512 607 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 GTF2IP78347 998 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 KRT85P78386 507 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 PDE4BQ07343 736 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 PPP2R5BQ15173 497 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 OCLNQ16625 522 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 MFSD14BQ5SR56 506 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 ANKK1Q8NFD2 765 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 BRI3BPQ8WY22 251 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 LY9Q9HBG7 655 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 NCOA5Q9HCD5 579 aaKnown RBP7.88□□□□□ -1.15
SLIRP-204ENST00000555890 CNPY2Q9Y2B0 182 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 DMDP11532 3685 aa7.88□□□□□ -1.15
SLIRP-204ENST00000555890 NAV1Q8NEY1 1877 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 CDK5RAP2Q96SN8 1893 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 GPR75-ASB3A0A0A6YYF3 556 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 GOLGA6L3A6NEY3 463 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 GOLGA8AA7E2F4 631 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 H3BRB1 525 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ORC4O43929 436 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 RANBP6O60518 1105 aaKnown RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ICMTO60725 284 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 CTDNEP1O95476 244 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 FGRP09769 529 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 VAMP1P23763 118 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 PSMC4P43686 418 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 RCAN1P53805 252 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 FOXD4L6Q3SYB3 417 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 CCDC178Q5BJE1 867 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ATL3Q6DD88 541 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 APOA5Q6Q788 366 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 FOXD4L3Q6VB84 417 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 IQCA1Q86XH1 822 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 FAM178BQ8IXR5 827 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 STK11IPQ8N1F8 1099 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 FAM43AQ8N2R8 423 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 WASF1Q92558 559 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 RNPC3Q96LT9 517 aaKnown RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF396Q96N95 335 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 SCAND2PQ9GZW5 306 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ZNF287Q9HBT7 754 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 INCENPQ9NQS7 918 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 MCM9Q9NXL9 1143 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 DLL3Q9NYJ7 618 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 ORC3Q9UBD5 711 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-204ENST00000555890 CFAP45Q9UL16 551 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 MYH1P12882 1939 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 MYH6P13533 1939 aa7.87□□□□□ -1.15
SLIRP-204ENST00000555890 DTNBO60941 627 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 INHAP05111 366 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 CALM1P0DP23 149 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 CALM2P0DP24 149 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 CALM3P0DP25 149 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 NBL1P41271 181 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 BTDP43251 543 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 UBE2HP62256 183 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 DNM1Q05193 864 aaKnown RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 SSRP1Q08945 709 aaKnown RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 TRIM29Q14134 588 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 LRRC26Q2I0M4 334 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 CAVIN1Q6NZI2 390 aaKnown RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 SH3BP5LQ7L8J4 393 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 PODNQ7Z5L7 613 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 BMP8AQ7Z5Y6 402 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 MICU3Q86XE3 530 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 GLYCTKQ8IVS8 523 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 SUGP1Q8IWZ8 645 aaKnown RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 TEX11Q8IYF3 940 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 TRIM22Q8IYM9 498 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 SH3RF3Q8TEJ3 882 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 NKD2Q969F2 451 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 C8orf76Q96K31 380 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 PRIMPOLQ96LW4 560 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 ZSCAN10Q96SZ4 725 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-204ENST00000555890 SPSB2Q99619 263 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 DEFB129Q9H1M3 183 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 KIAA1024Q9UPX6 916 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 PCDHAC2Q9Y5I4 1007 aa7.86□□□□□ -1.15
SLIRP-204ENST00000555890 NID2Q14112 1375 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 FOCADQ5VW36 1801 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 PFASO15067 1338 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 ELP1O95163 1332 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 TNKSO95271 1327 aa7.85□□□□□ -1.15
SLIRP-204ENST00000555890 STK36Q9NRP7 1315 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms