RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 PSMD2Q13200 908 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 SPARCL1Q14515 664 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 GNPTABQ3T906 1256 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 CDAN1Q8IWY9 1227 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 SYT2Q8N9I0 419 aaPredicted RBP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 PPP1R37O75864 691 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 CCZ1BP86790 482 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 CCZ1P86791 482 aaPredicted RBP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 GDAP1Q8TB36 358 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 GFM2Q969S9 779 aaKnown RBP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 MIS12Q9H081 205 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 NDST4Q9H3R1 872 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 ST7Q9NRC1 585 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 C1orf112Q9NSG2 853 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 GCP02774 474 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 MMEL1Q495T6 779 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 CD19P15391 556 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 YWHAGP61981 247 aaKnown RBP eCLIP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 SATB1Q01826 763 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 LGALS16A8MUM7 142 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 PDE6BP35913 854 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 STAMBPL1Q96FJ0 436 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 FGD4Q96M96 766 aa19.01■□□□□ 0.63
SYNE3-204ENST00000555759 DBNLQ9UJU6 430 aaKnown RBP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 EXOC1LA0A1B0GW35 172 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 TMEM232C9JQI7 657 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 APOEP02649 317 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 MT-ND3P03897 115 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 NSFP46459 744 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 GCFC2P16383 781 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 MAGOHP61326 146 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 LRRC63Q05C16 580 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 TRIML2Q8N7C3 387 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 NRBF2Q96F24 287 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 CALR3Q96L12 384 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 GYG2O15488 501 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 COBLO75128 1261 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 VSNL1P62760 191 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 IPO5O00410 1097 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 HARSP12081 509 aaKnown RBP19■□□□□ 0.63
SYNE3-204ENST00000555759 RANBP1P43487 201 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 RDH13Q8NBN7 331 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 GRAMD1AQ96CP6 724 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 TRPC6Q9Y210 931 aa19■□□□□ 0.63
SYNE3-204ENST00000555759 NR2F2P24468 414 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
SYNE3-204ENST00000555759 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 GOLPH3LQ9H4A5 285 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 STAM2O75886 525 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 MFAP3P55082 362 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 ATG16L1Q676U5 607 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 FAM133AQ8N9E0 248 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 OSBPL1AQ9BXW6 950 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYNE3-204ENST00000555759 ADGBQ8N7X0 1667 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 TRPA1O75762 1119 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 CA4P22748 312 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 RWDD2BP57060 319 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 MKRN3Q13064 507 aaKnown RBP18.99■□□□□ 0.63
SYNE3-204ENST00000555759 ARL6IP4Q66PJ3 421 aaKnown RBP18.99■□□□□ 0.63
SYNE3-204ENST00000555759 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
SYNE3-204ENST00000555759 PCDHA4Q9UN74 947 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 MAST3O60307 1309 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 MYL7Q01449 175 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 FAM47AQ5JRC9 791 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 SLC30A9Q6PML9 568 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 TEX9Q8N6V9 391 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 TRIM55Q9BYV6 548 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
SYNE3-204ENST00000555759 ARHGAP10A1A4S6 786 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 SRGAP2O75044 1071 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 CCDC125Q86Z20 511 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 PNMA1Q8ND90 353 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 SH2B2O14492 632 aaPredicted RBP18.98■□□□□ 0.63
SYNE3-204ENST00000555759 CIAO1O76071 339 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 POLR2BP30876 1174 aaKnown RBP18.98■□□□□ 0.63
SYNE3-204ENST00000555759 SLC1A4P43007 532 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 FAM178BQ8IXR5 827 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 AP1M1Q9BXS5 423 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
SYNE3-204ENST00000555759 ECT2Q9H8V3 914 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 PDHA1P08559 390 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 TNNI1P19237 187 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 POLA2Q14181 598 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 FAM81BQ96LP2 452 aa18.98■□□□□ 0.63
SYNE3-204ENST00000555759 STXBP3O00186 592 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 PTPREP23469 700 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 KRT81Q14533 505 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 PLCB4Q15147 1175 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 CEP70Q8NHQ1 597 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 HNRNPLLQ8WVV9 542 aaKnown RBP18.97■□□□□ 0.63
SYNE3-204ENST00000555759 KIF2CQ99661 725 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 FAM167BQ9BTA0 163 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 ZC3H12CQ9C0D7 883 aaKnown RBP18.97■□□□□ 0.63
SYNE3-204ENST00000555759 PKD2L1Q9P0L9 805 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
SYNE3-204ENST00000555759 SH3BP5O60239 455 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms