RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 VWA5AO00534 786 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 TLL1O43897 1013 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 SNAP25P60880 206 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 PKP1Q13835 747 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 PRRC2BQ5JSZ5 2229 aaKnown RBP13.48□□□□□ -0.25
MTHFD1-211ENST00000555709 GBF1Q92538 1859 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 PI4K2BG5E9Z4 385 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 PQBP1O60828 265 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 FDX1P10109 184 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 FOSBP53539 338 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 NHLH1Q02575 133 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 NPY5RQ15761 445 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 LARP1BQ659C4 914 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 OLFML2BQ68BL8 750 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 AMNQ9BXJ7 453 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 SH3GLB2Q9NR46 395 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
MTHFD1-211ENST00000555709 ZNF236Q9UL36 1845 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 ESYT2A0FGR8 921 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 STX6O43752 255 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 TIMP1P01033 207 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 ICAM1P05362 532 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 OAZ1P54368 228 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 CCNA1P78396 465 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 RAB30Q15771 203 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 KRT40Q6A162 431 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 CCDC174Q6PII3 467 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 ANKRD33Q7Z3H0 272 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 FBXO11Q86XK2 927 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 HERVK_113Q902F9 699 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 NKX2-4Q9H2Z4 354 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 HOXC10Q9NYD6 342 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 YBX2Q9Y2T7 364 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 ZDHHC9Q9Y397 364 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
MTHFD1-211ENST00000555709 PRR33A8MZF0 331 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 ZBED4O75132 1171 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 BRD1O95696 1058 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 MMP1P03956 469 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 NAPAP54920 295 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 TMEM132BQ14DG7 1078 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 WDR78Q5VTH9 848 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 MFSD5Q6N075 450 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 MB21D1Q8N884 522 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 CCDC148Q8NFR7 591 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 TOX2Q96NM4 488 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 KCNJ14Q9UNX9 436 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
MTHFD1-211ENST00000555709 VPS37CA5D8V6 355 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 H3BQV1 296 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 OPLAHO14841 1288 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 XBP1P17861 261 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 TRIM29Q14134 588 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 USH1GQ495M9 461 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 MICALL1Q8N3F8 863 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 DAGLBQ8NCG7 672 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 CCDC12Q8WUD4 166 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 RAVER2Q9HCJ3 691 aaKnown RBP13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 BTBD7Q9P203 1132 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 MSRAQ9UJ68 235 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 IVNS1ABPQ9Y6Y0 642 aa13.44□□□□□ -0.26
MTHFD1-211ENST00000555709 ABCB11O95342 1321 aa13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 A0A1W2PQ45 241 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 A0A1W2PQY0 241 aa13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 ADAMTS3O15072 1205 aa13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 POU3F3P20264 500 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 NUCB2P80303 420 aa13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 TRAF1Q13077 416 aa13.43□□□□□ -0.26
MTHFD1-211ENST00000555709 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■■□□ 18.9
MTHFD1-211ENST00000555709 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms