RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-222	ENST00000555617	STK31	Q9BXU1	1019 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	GNL3L	Q9NVN8	582 aa	Known RBP	13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	ITGB1	P05556	798 aa		13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	ATP2B3	Q16720	1220 aa		13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	CERKL	Q49MI3	558 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	EEPD1	Q7L9B9	569 aa		13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	MTG1	Q9BT17	334 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	NOD1	Q9Y239	953 aa		13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	DENND4A	Q7Z401	1863 aa		13.93	□□□□□ -0.18
ABCD4-222	ENST00000555617	PRB1	P04280	392 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	TRIM71	Q2Q1W2	868 aa	Known RBP	13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	FIBCD1	Q8N539	461 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	FEZF2	Q8TBJ5	459 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	SPPL3	Q8TCT6	385 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	RC3H2	Q9HBD1	1191 aa	Known RBP	13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	IFT57	Q9NWB7	429 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	ASXL3	Q9C0F0	2248 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	CACNA1F	O60840	1977 aa		13.92	□□□□□ -0.18
ABCD4-222	ENST00000555617	ZBTB22	O15209	634 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	SPTLC1	O15269	473 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	KCNC3	Q14003	757 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	ZNF618	Q5T7W0	954 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	SNRNP48	Q6IEG0	339 aa	Known RBP	13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	CLP1	Q92989	425 aa	Known RBP	13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	EPC1	Q9H2F5	836 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	POLR3E	Q9NVU0	708 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617		Q9Y3F1	56 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	NR2E1	Q9Y466	385 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	MYO9A	B2RTY4	2548 aa		13.91	□□□□□ -0.18
ABCD4-222	ENST00000555617	PDS5A	Q29RF7	1337 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	MIA3	Q5JRA6	1907 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	EYA2	O00167	538 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	TM4SF5	O14894	197 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	NARS	O43776	548 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	LRRN2	O75325	713 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	RFX5	P48382	616 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	TBC1D8B	Q0IIM8	1120 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	PPP1R9A	Q9ULJ8	1098 aa		13.9	□□□□□ -0.18
ABCD4-222	ENST00000555617	TMEM8B	A6NDV4	472 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	WEE2	P0C1S8	567 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	SLC4A3	P48751	1232 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	CHMP4BP1	P59074	171 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	ANKRD54	Q6NXT1	300 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	KIF12	Q96FN5	646 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	NEK1	Q96PY6	1258 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	IFIH1	Q9BYX4	1025 aa	Known RBP	13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	GPR108	Q9NPR9	543 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	ABCA12	Q86UK0	2595 aa		13.89	□□□□□ -0.19
ABCD4-222	ENST00000555617	C1QL1	O75973	258 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	HLA-DOA	P06340	250 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	LDHC	P07864	332 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	COPB2	P35606	906 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	PTPN11	Q06124	597 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	LPAL2	Q16609	132 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	CCDC155	Q8N6L0	562 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	PURB	Q96QR8	312 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	TEX13B	Q9BXU2	312 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	ADAM33	Q9BZ11	813 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	TLE6	Q9H808	572 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	TBC1D17	Q9HA65	648 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	FBXL21	Q9UKT6	434 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	GPSM3	Q9Y4H4	160 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	IL16	Q14005	1332 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	ADGRA3	Q8IWK6	1321 aa		13.88	□□□□□ -0.19
ABCD4-222	ENST00000555617	STK25	O00506	426 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	LILRB5	O75023	590 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	PLA2G2A	P14555	144 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	TEC	P42680	631 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	GSTO1	P78417	241 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	PLEKHG4	Q58EX7	1191 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	IQSEC1	Q6DN90	963 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	ZDHHC14	Q8IZN3	488 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	POF1B	Q8WVV4	589 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	PIK3R5	Q8WYR1	880 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	SECISBP2L	Q93073	1101 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	PPP2R3C	Q969Q6	453 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	IL17RA	Q96F46	866 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	LSM14B	Q9BX40	385 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	VCPKMT	Q9H867	229 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	CABP5	Q9NP86	173 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	SERPINB13	Q9UIV8	391 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	DUSP12	Q9UNI6	340 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	MYH7B	A7E2Y1	1941 aa		13.87	□□□□□ -0.19
ABCD4-222	ENST00000555617	MYH8	P13535	1937 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	WDR46	O15213	610 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	PARN	O95453	639 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	GNAI1	P63096	354 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	DYNLL1	P63167	89 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	DUSP6	Q16828	381 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	COL28A1	Q2UY09	1125 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	PRR23C	Q6ZRP0	262 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	ZBTB44	Q8NCP5	570 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	TSR2	Q969E8	191 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	RNF216	Q9NWF9	866 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	RAI14	Q9P0K7	980 aa		13.86	□□□□□ -0.19
ABCD4-222	ENST00000555617	HMG20B	Q9P0W2	317 aa		13.86	□□□□□ -0.19

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