RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 DCDC2CA8MYV0 355 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 ARVCFO00192 962 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 ZEB2O60315 1214 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 ARIH2O95376 493 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 EIF2AK2P19525 551 aaKnown RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 RXRAP19793 462 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 HOXA13P31271 388 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 CPT1AP50416 773 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 RCAN1P53805 252 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 STXBP2Q15833 593 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 APOA5Q6Q788 366 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 MICU3Q86XE3 530 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 FAM126BQ8IXS8 530 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 SRBD1Q8N5C6 995 aaKnown RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 PDCD2LQ9BRP1 358 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 SLKQ9H2G2 1235 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-215ENST00000555616 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 TPCN1Q9ULQ1 816 aa11.09□□□□□ -0.63
ACTN1-215ENST00000555616 ZBTB43O43298 467 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.64
ACTN1-215ENST00000555616 NR3C2P08235 984 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 TXNP10599 105 aaKnown RBP11.08□□□□□ -0.64
ACTN1-215ENST00000555616 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
ACTN1-215ENST00000555616 LRIT3Q3SXY7 679 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 OR6J1Q8NGC5 347 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
ACTN1-215ENST00000555616 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
ACTN1-215ENST00000555616 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
ACTN1-215ENST00000555616 MYH6P13533 1939 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 NID2Q14112 1375 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 A6NJR5 290 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 GOLGA8AA7E2F4 631 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 SOX1O00570 391 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 PFKFB2O60825 505 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 ITGB8P26012 769 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 PDIA3P30101 505 aaKnown RBP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 ARHGAP1Q07960 439 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 FUT2Q10981 343 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 STK3Q13188 491 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 ITGA7Q13683 1181 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 PGM5Q15124 567 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 ME3Q16798 604 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 RAB11FIP4Q86YS3 637 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 COPS5Q92905 334 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 BADQ92934 168 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 GTF3C6Q969F1 213 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 TMEM39AQ9NV64 488 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 RBM28Q9NW13 759 aaKnown RBP11.07□□□□□ -0.64
ACTN1-215ENST00000555616 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 CNTNAP5Q8WYK1 1306 aa11.07□□□□□ -0.64
ACTN1-215ENST00000555616 CPLX1O14810 134 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 TLR3O15455 904 aaKnown RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 KPNA6O60684 536 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 RGS20O76081 388 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 GH1P01241 217 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 CD4P01730 458 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 RAG1P15918 1043 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 CUL4AQ13619 759 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 SEPT14Q6ZU15 432 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 EMID1Q96A84 441 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 VTI1AQ96AJ9 217 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 DDX41Q9UJV9 622 aaKnown RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-215ENST00000555616 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
ACTN1-215ENST00000555616 MEIS2O14770 477 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 CDKL5O76039 1030 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 LARGE1O95461 756 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 TIMP1P01033 207 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 MMP3P08254 477 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 MYL3P08590 195 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 CCND2P30279 289 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 PSMC6P62333 389 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 FPGSQ05932 587 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 RTN1Q16799 776 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 LY6KQ17RY6 165 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 PPP1R18Q6NYC8 613 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 KCNV1Q6PIU1 500 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms