RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 STK32CQ86UX6 486 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 TM9SF2Q99805 663 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 VTI1BQ9UEU0 232 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 TNFRSF18Q9Y5U5 241 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 FAM86C2PA6NEL3 165 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 B4GALT4O60513 344 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 PPFIBP1Q86W92 1011 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 SLITRK4Q8IW52 837 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 NKD1Q969G9 470 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 SYT3Q9BQG1 590 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 YIPF4Q9BSR8 244 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 CSRNP2Q9H175 543 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 SEC61A2Q9H9S3 476 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 UBP1Q9NZI7 540 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 WHRNQ9P202 907 aa5.95□□□□□ -1.46
SRP54-207ENST00000555535 ZFR2Q9UPR6 939 aaKnown RBP5.95□□□□□ -1.46
SRP54-207ENST00000555535 A0A087X1B8 175 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 C2orf71A6NGG8 1288 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 SGSM2O43147 1006 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 HNRNPA0Q13151 305 aaKnown RBP5.94□□□□□ -1.46
SRP54-207ENST00000555535 ADAM9Q13443 819 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 NRN1LQ496H8 165 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 CPNE8Q86YQ8 564 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 FAM161BQ96MY7 647 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 MEGF9Q9H1U4 602 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 COPRSQ9NQ92 184 aa5.94□□□□□ -1.46
SRP54-207ENST00000555535 C7orf72A4D263 438 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 STXBP3O00186 592 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 TP53P04637 393 aaPredicted RBP5.93□□□□□ -1.46
SRP54-207ENST00000555535 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
SRP54-207ENST00000555535 PTH1RQ03431 593 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 PPP2R5DQ14738 602 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 PLEKHO2Q8TD55 490 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 CRAMP1Q96RY5 1269 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 NT5C1AQ9BXI3 368 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
SRP54-207ENST00000555535 NARSO43776 548 aaKnown RBP5.92□□□□□ -1.46
SRP54-207ENST00000555535 AMPD2Q01433 879 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 NFATC3Q12968 1075 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 MILR1Q7Z6M3 343 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 EDAQ92838 391 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 TMEM209Q96SK2 561 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 ADOQ96SZ5 270 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 ZNRF3Q9ULT6 936 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 PCSK5Q92824 1860 aa5.92□□□□□ -1.46
SRP54-207ENST00000555535 PATL2C9JE40 543 aaKnown RBP5.91□□□□□ -1.46
SRP54-207ENST00000555535 GRB10Q13322 594 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 CR1LQ2VPA4 569 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 LSM12Q3MHD2 195 aaKnown RBP5.91□□□□□ -1.46
SRP54-207ENST00000555535 ZG16BQ96DA0 208 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 PTPN18Q99952 460 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 MCMBPQ9BTE3 642 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 ADAM29Q9UKF5 820 aa5.91□□□□□ -1.46
SRP54-207ENST00000555535 ZNF214Q9UL59 606 aaPredicted RBP5.91□□□□□ -1.46
SRP54-207ENST00000555535 STAT5AP42229 794 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 USP39Q53GS9 565 aaKnown RBP5.9□□□□□ -1.46
SRP54-207ENST00000555535 MROH9Q5TGP6 573 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 RIOX2Q8IUF8 465 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 MARCH2Q9P0N8 246 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 ADAMTS1Q9UHI8 967 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 TIMELESSQ9UNS1 1208 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 ZDHHC9Q9Y397 364 aa5.9□□□□□ -1.46
SRP54-207ENST00000555535 CBFA2T2O43439 604 aa5.89□□□□□ -1.47
SRP54-207ENST00000555535 PPM1BO75688 479 aa5.89□□□□□ -1.47
SRP54-207ENST00000555535 MLLT6P55198 1093 aaPredicted RBP5.89□□□□□ -1.47
SRP54-207ENST00000555535 TOE1Q96GM8 510 aaKnown RBP5.89□□□□□ -1.47
SRP54-207ENST00000555535 NAF1Q96HR8 494 aaKnown RBP5.89□□□□□ -1.47
SRP54-207ENST00000555535 MMP19Q99542 508 aa5.89□□□□□ -1.47
SRP54-207ENST00000555535 THBDP07204 575 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 GUCY2CP25092 1073 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 CHRNA2Q15822 529 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 TCTN3Q6NUS6 607 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 DPY19L2P1Q6NXN4 242 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 UNC5AQ6ZN44 842 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 HS2ST1Q7LGA3 356 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 RALYLQ86SE5 291 aaKnown RBP5.88□□□□□ -1.47
SRP54-207ENST00000555535 ZCCHC14Q8WYQ9 949 aaKnown RBP5.88□□□□□ -1.47
SRP54-207ENST00000555535 HAUS7Q99871 368 aa5.88□□□□□ -1.47
SRP54-207ENST00000555535 C22orf46C9J442 243 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 COMTP21964 271 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 DPY19L1Q2PZI1 675 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 HEATR6Q6AI08 1181 aaKnown RBP5.87□□□□□ -1.47
SRP54-207ENST00000555535 IGFL4Q6B9Z1 124 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 TRMT10BQ6PF06 316 aaKnown RBP5.87□□□□□ -1.47
SRP54-207ENST00000555535 ERICH6Q7L0X2 663 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 IFNL2Q8IZJ0 200 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 GIMAP8Q8ND71 665 aaPredicted RBP5.87□□□□□ -1.47
SRP54-207ENST00000555535 LMF1Q96S06 567 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 FAM86C1Q9NVL1 165 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 CROTQ9UKG9 612 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 ZNF652Q9Y2D9 606 aa5.87□□□□□ -1.47
SRP54-207ENST00000555535 FOXS1O43638 330 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 VAMP4O75379 141 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 CNOT4O95628 575 aaKnown RBP5.86□□□□□ -1.47
SRP54-207ENST00000555535 LMO1P25800 156 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 SCUBE1Q8IWY4 988 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms