RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 PPP2R5EQ16537 467 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 KIAA1211LQ6NV74 962 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 DCP2Q8IU60 420 aaKnown RBP4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 ADAMTS17Q8TE56 1095 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 COPS5Q92905 334 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 DDX11Q96FC9 970 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 MMP19Q99542 508 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 GORASP1Q9BQQ3 440 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 PCDH18Q9HCL0 1135 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 CLEC1BQ9P126 229 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 APEX2Q9UBZ4 518 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 ING1Q9UK53 422 aaPredicted RBP4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 AKT3Q9Y243 479 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 EMC9Q9Y3B6 208 aa4.36□□□□□ -1.71
EFCAB11-206ENST00000555430 KCNH1O95259 989 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 PLS3P13797 630 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 THBS2P35442 1172 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 GJA8P48165 433 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 NASPP49321 788 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 SMAD4Q13485 552 aaKnown RBP4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 CSRP2Q16527 193 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 MBLAC2Q68D91 279 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 POMZP3Q6PJE2 187 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 VHLLQ6RSH7 139 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 MIB1Q86YT6 1006 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 CRACR2BQ8N4Y2 399 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 BVESQ8NE79 360 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 DPF3Q92784 378 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 APBA2Q99767 749 aa4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 C11orf84Q9BUA3 381 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-206ENST00000555430 NAT2P11245 290 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 RPL13P26373 211 aaKnown RBP4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 ZNF143P52747 638 aaPredicted RBP4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 SCRN1Q12765 414 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 KYQ8NBH2 561 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 CPLX3Q8WVH0 158 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 AP5M1Q9H0R1 490 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 GPRC5CQ9NQ84 441 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 MARCH2Q9P0N8 246 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 HS3ST3A1Q9Y663 406 aa4.34□□□□□ -1.71
EFCAB11-206ENST00000555430 NOP56O00567 594 aaKnown RBP4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 SGSM2O43147 1006 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 PLATP00750 562 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 THBDP07204 575 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 INF2Q27J81 1249 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 RGL3Q3MIN7 710 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 FAM26FQ5R3K3 315 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 GTF2IRD2BQ6EKJ0 949 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 GTF2IRD2Q86UP8 949 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 NT5DC4Q86YG4 428 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 FAM26EQ8N5C1 309 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 TTLL6Q8N841 843 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 FAM169BQ8N8A8 192 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 SEC14L1Q92503 715 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 SEC16BQ96JE7 1060 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 SYT3Q9BQG1 590 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 CYP26B1Q9NR63 512 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 TSC22D4Q9Y3Q8 395 aa4.33□□□□□ -1.72
EFCAB11-206ENST00000555430 C22orf46C9J442 243 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 SLC6A11P48066 632 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 MFAP1P55081 439 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 CYP4F3Q08477 520 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 KIAA2012Q0VF49 1180 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 NCAPHQ15003 741 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 TBC1D10BQ4KMP7 808 aaPredicted RBP4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 IQCEQ6IPM2 695 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 CD300LDQ6UXZ3 194 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 ZC3H18Q86VM9 953 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 TEX2Q8IWB9 1127 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 TRIM59Q8IWR1 403 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 CHST13Q8NET6 341 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 NPLOC4Q8TAT6 608 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 KISS1RQ969F8 398 aaPredicted RBP4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 MRGPRX3Q96LB0 322 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 NKX2-4Q9H2Z4 354 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 DLL4Q9NR61 685 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 BTG4Q9NY30 223 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 STRIP2Q9ULQ0 834 aa4.32□□□□□ -1.72
EFCAB11-206ENST00000555430 ITGA1P56199 1179 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 PRR31Q5SQ13 230 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 MROH9Q5TGP6 573 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 RIOX2Q8IUF8 465 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 LGI4Q8N135 537 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 Q8N1Y9 231 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 FRS2Q8WU20 508 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 NGRNQ9NPE2 291 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 INVSQ9Y283 1065 aa4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 TIMM13Q9Y5L4 95 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-206ENST00000555430 WDR33Q9C0J8 1336 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 ZBTB7CA1YPR0 619 aa4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 FPR2P25090 351 aa4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 C9orf131Q5VYM1 1079 aa4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 E4F1Q66K89 784 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-206ENST00000555430 BORAQ6PGQ7 559 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms