RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RCAN1P53805 252 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 PSMC6P62333 389 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 MRPS9P82933 396 aaKnown RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 MDM2Q00987 491 aaPredicted RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 UBE2SQ16763 222 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 HEATR3Q7Z4Q2 680 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 OR6J1Q8NGC5 347 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 PPP1R13LQ8WUF5 828 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 MPHOSPH6Q99547 160 aaKnown RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 TM6SF1Q9BZW5 370 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 NID2Q14112 1375 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 ELP1O95163 1332 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 B4DLN1 442 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
SNX6-203ENST00000555416 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
SNX6-203ENST00000555416 EVCP57679 992 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 SP2Q02086 613 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 TTLL4Q14679 1199 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 VTI1AQ96AJ9 217 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 GLT1D1Q96MS3 346 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 PSTPIP2Q9H939 334 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 DDX41Q9UJV9 622 aaKnown RBP15.76■□□□□ 0.11
SNX6-203ENST00000555416 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
SNX6-203ENST00000555416 LTBP2Q14767 1821 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 STXBP3O00186 592 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 ARVCFO00192 962 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 PIK3CDO00329 1044 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 SORBS3O60504 671 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
SNX6-203ENST00000555416 PURAQ00577 322 aaKnown RBP15.75■□□□□ 0.11
SNX6-203ENST00000555416 NTRK3Q16288 839 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 PKN1Q16512 942 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 SLC43A3Q8NBI5 491 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
SNX6-203ENST00000555416 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
SNX6-203ENST00000555416 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
SNX6-203ENST00000555416 A6NJR5 290 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 NKRFO15226 690 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNX6-203ENST00000555416 MYL3P08590 195 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 CCND2P30279 289 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 SEMA3FQ13275 785 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 PHKBQ93100 1093 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 PDRG1Q9NUG6 133 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
SNX6-203ENST00000555416 DTNBO60941 627 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 GH1P01241 217 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 CLTBP09497 229 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 C8orf34Q49A92 452 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 BADQ92934 168 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 CUL5Q93034 780 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 PGBD1Q96JS3 809 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 TOX2Q96NM4 488 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 BARHL2Q9NY43 387 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
SNX6-203ENST00000555416 LAMA3Q16787 3333 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 KIAA0355O15063 1070 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 ZEB2O60315 1214 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 CABYRO75952 493 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 MMP3P08254 477 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 UBA1P22314 1058 aaKnown RBP15.72■□□□□ 0.11
SNX6-203ENST00000555416 BMP8BP34820 402 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 CPT1AP50416 773 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 NAPAP54920 295 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
SNX6-203ENST00000555416 IL17RAQ96F46 866 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 INPP4AQ96PE3 977 aaPredicted RBP15.72■□□□□ 0.11
SNX6-203ENST00000555416 TRPV6Q9H1D0 765 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
SNX6-203ENST00000555416 SCN10AQ9Y5Y9 1956 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 MYH7BA7E2Y1 1941 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 DCDC2CA8MYV0 355 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 PRPF3O43395 683 aaKnown RBP15.71■□□□□ 0.11
SNX6-203ENST00000555416 CD4P01730 458 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 SCG2P13521 617 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 FXR1P51114 621 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX6-203ENST00000555416 STK3Q13188 491 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 PCNX4Q63HM2 1172 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 KAT2BQ92831 832 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 UBE2OQ9C0C9 1292 aaKnown RBP15.71■□□□□ 0.11
SNX6-203ENST00000555416 RIC8AQ9NPQ8 531 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 TMEM39AQ9NV64 488 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
SNX6-203ENST00000555416 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 SPATA31C2B4DYI2 1134 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 RBAK-RBAKDNI3L0D1 243 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms