RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 ZNF577Q9BSK1 485 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 ZBTB48P10074 688 aaPredicted RBP11.51□□□□□ -0.57
NEK9-205ENST00000555405 FCER1AP12319 257 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 MB21D1Q8N884 522 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 TMEM87AQ8NBN3 555 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
NEK9-205ENST00000555405 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 EDIL3O43854 480 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 GAS7O60861 476 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 TBC1D8O95759 1140 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CCNA1P78396 465 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CEP55Q53EZ4 464 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CABP7Q86V35 215 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 NSUN6Q8TEA1 469 aaKnown RBP11.5□□□□□ -0.57
NEK9-205ENST00000555405 CCDC102AQ96A19 550 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
NEK9-205ENST00000555405 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
NEK9-205ENST00000555405 MANSC4A6NHS7 340 aaPredicted RBP11.5□□□□□ -0.57
NEK9-205ENST00000555405 SREBF1P36956 1147 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 LRCH2Q5VUJ6 765 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 PDCD2LQ9BRP1 358 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
NEK9-205ENST00000555405 STAT6P42226 847 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 USP11P51784 963 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 PDE4DQ08499 809 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 PNOCQ13519 176 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 KRT79Q5XKE5 535 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 PXMP2Q9NR77 195 aa11.5□□□□□ -0.57
NEK9-205ENST00000555405 MSH4O15457 936 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 CNMDO75829 334 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
NEK9-205ENST00000555405 CYP2B6P20813 491 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 SASS6Q6UVJ0 657 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 RIOX2Q8IUF8 465 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 TPH2Q8IWU9 490 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 ITGB5P18084 799 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 PTGS1P23219 599 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 MTMR1Q13613 665 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 PGM5Q15124 567 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 C4orf32Q8N8J7 132 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
NEK9-205ENST00000555405 RESP18Q5W5W9 173 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 HAS1Q92839 578 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 CALML4Q96GE6 196 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 KCNH7Q9NS40 1196 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 ADAMTS5Q9UNA0 930 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 A0A087X0B3 334 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 IPO5O00410 1097 aaKnown RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 SLC10A3P09131 477 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 HSD17B4P51659 736 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 CRHR2Q13324 411 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 CTTNQ14247 550 aaKnown RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 MAEAQ7L5Y9 396 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 CREBRFQ8IUR6 639 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 A0A1W2PQ27 194 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 A0A1W2PQ64 194 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 A0A1W2PQD8 194 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 ATP9AO75110 1047 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 IDEP14735 1019 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 GCFC2P16383 781 aaKnown RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 ADORA2AP29274 412 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 CCND2P30279 289 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 OAZ1P54368 228 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 DYMQ7RTS9 669 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
NEK9-205ENST00000555405 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 ZFYVE28Q9HCC9 887 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 CCDC39Q9UFE4 941 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 KIAA1024Q9UPX6 916 aa11.48□□□□□ -0.57
NEK9-205ENST00000555405 PIK3CDO00329 1044 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 SLC25A27O95847 323 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 SNW1Q13573 536 aaKnown RBP11.47□□□□□ -0.57
NEK9-205ENST00000555405 GSE1Q14687 1217 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 PLCG1P19174 1290 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 STXBP2Q15833 593 aa11.47□□□□□ -0.57
NEK9-205ENST00000555405 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms