RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CYR61O00622 381 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 CD3EP07766 207 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 CANXP27824 592 aaKnown RBP7.91□□□□□ -1.14
VRK1-205ENST00000555402 ACVRL1P37023 503 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 FXNQ16595 210 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 AXDND1Q5T1B0 1012 aaPredicted RBP7.91□□□□□ -1.14
VRK1-205ENST00000555402 NETO2Q8NC67 525 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 MKL1Q969V6 931 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 TM9SF2Q99805 663 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 FBLN5Q9UBX5 448 aa7.91□□□□□ -1.14
VRK1-205ENST00000555402 ZNF536O15090 1300 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 ZBTB7AO95365 584 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 CD247P20963 164 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 POU4F1Q01851 419 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 PPFIBP1Q86W92 1011 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 ZFPM1Q8IX07 1006 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 LZTR1Q8N653 840 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 CELF2-AS1Q8N7Q2 184 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 DEPDC7Q96QD5 511 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 RWDD3Q9Y3V2 267 aa7.9□□□□□ -1.14
VRK1-205ENST00000555402 PPP1R11O60927 126 aaPredicted RBP7.89□□□□□ -1.15
VRK1-205ENST00000555402 GUCY2CP25092 1073 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 RPL13P26373 211 aaKnown RBP7.89□□□□□ -1.15
VRK1-205ENST00000555402 CASP7P55210 303 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 DDR2Q16832 855 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 CRIP3Q6Q6R5 217 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 GLB1LQ6UWU2 654 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 TSC22D4Q9Y3Q8 395 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 ZNF451Q9Y4E5 1061 aa7.89□□□□□ -1.15
VRK1-205ENST00000555402 CADPSQ9ULU8 1353 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 MROH6A6NGR9 719 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 DDAH1O94760 285 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 CYP2C8P10632 490 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 CDSNQ15517 529 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 BORAQ6PGQ7 559 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 GORASP1Q9BQQ3 440 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 NOL6Q9H6R4 1146 aaKnown RBP7.88□□□□□ -1.15
VRK1-205ENST00000555402 SNTG2Q9NY99 539 aa7.88□□□□□ -1.15
VRK1-205ENST00000555402 A0A1W2PQH9 124 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 TP53P04637 393 aaPredicted RBP7.87□□□□□ -1.15
VRK1-205ENST00000555402 THBS2P35442 1172 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 RCSD1Q6JBY9 416 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 FAM124AQ86V42 546 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
VRK1-205ENST00000555402 KISS1RQ969F8 398 aaPredicted RBP7.87□□□□□ -1.15
VRK1-205ENST00000555402 ZDHHC15Q96MV8 337 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 C11orf84Q9BUA3 381 aaPredicted RBP7.87□□□□□ -1.15
VRK1-205ENST00000555402 SLC12A7Q9Y666 1083 aa7.87□□□□□ -1.15
VRK1-205ENST00000555402 FAM221BA6H8Z2 402 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 C8BP07358 591 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 ITGA4P13612 1032 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 IFRD2Q12894 506 aaPredicted RBP7.86□□□□□ -1.15
VRK1-205ENST00000555402 RASA3Q14644 834 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 EEF1DP3Q658K8 133 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 MCTP2Q6DN12 878 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 SDE2Q6IQ49 451 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 SYT3Q9BQG1 590 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 MTA3Q9BTC8 594 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 CCDC113Q9H0I3 377 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 TBX22Q9Y458 520 aa7.86□□□□□ -1.15
VRK1-205ENST00000555402 A0A087WZG4 1122 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 UNC5AQ6ZN44 842 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 LRP10Q7Z4F1 713 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 JAZF1Q86VZ6 243 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 TAB3Q8N5C8 712 aaPredicted RBP7.85□□□□□ -1.15
VRK1-205ENST00000555402 MICAL1Q8TDZ2 1067 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 PCDH18Q9HCL0 1135 aa7.85□□□□□ -1.15
VRK1-205ENST00000555402 DIS3Q9Y2L1 958 aaKnown RBP7.85□□□□□ -1.15
VRK1-205ENST00000555402 MRPL42Q9Y6G3 142 aaKnown RBP7.85□□□□□ -1.15
VRK1-205ENST00000555402 PDPK1O15530 556 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 FZD7O75084 574 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 GJB6O95452 261 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.15
VRK1-205ENST00000555402 KYQ8NBH2 561 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 TXNDC5Q8NBS9 432 aaKnown RBP7.84□□□□□ -1.15
VRK1-205ENST00000555402 MCMBPQ9BTE3 642 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 ZNF747Q9BV97 191 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 FAM86C1Q9NVL1 165 aa7.84□□□□□ -1.15
VRK1-205ENST00000555402 AURKAO14965 403 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 PPP2R5DQ14738 602 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 ZYXQ15942 572 aaKnown RBP7.83□□□□□ -1.16
VRK1-205ENST00000555402 WWC2Q6AWC2 1192 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 VHLLQ6RSH7 139 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 USP51Q70EK9 711 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 FAM178BQ8IXR5 827 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 USP33Q8TEY7 942 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 GULP1Q9UBP9 304 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 MSRB2Q9Y3D2 182 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 SIT1Q9Y3P8 196 aa7.83□□□□□ -1.16
VRK1-205ENST00000555402 B2RBV5 119 aa7.82□□□□□ -1.16
VRK1-205ENST00000555402 CLSTN1O94985 981 aa7.82□□□□□ -1.16
VRK1-205ENST00000555402 MTERF2Q49AM1 385 aa7.82□□□□□ -1.16
VRK1-205ENST00000555402 CDK5RAP1Q96SZ6 601 aaKnown RBP7.82□□□□□ -1.16
VRK1-205ENST00000555402 DNAJC7Q99615 494 aa7.82□□□□□ -1.16
VRK1-205ENST00000555402 VPS11Q9H270 941 aa7.82□□□□□ -1.16
VRK1-205ENST00000555402 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
VRK1-205ENST00000555402 RASGRF1Q13972 1273 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms