RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NTMQ9P121 344 aa8.25□□□□□ -1.09
VRK1-203ENST00000555067 PPP1R11O60927 126 aaPredicted RBP8.24□□□□□ -1.09
VRK1-203ENST00000555067 PLS3P13797 630 aa8.24□□□□□ -1.09
VRK1-203ENST00000555067 GTF2IRD2BQ6EKJ0 949 aa8.24□□□□□ -1.09
VRK1-203ENST00000555067 GTF2IRD2Q86UP8 949 aa8.24□□□□□ -1.09
VRK1-203ENST00000555067 LOXL4Q96JB6 756 aa8.24□□□□□ -1.09
VRK1-203ENST00000555067 THBDP07204 575 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
VRK1-203ENST00000555067 VPS37DQ86XT2 251 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 SMARCC2Q8TAQ2 1214 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 PPP1R14AQ96A00 147 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 MRGPRX3Q96LB0 322 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 GPRC5CQ9NQ84 441 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 ACTR10Q9NZ32 417 aa8.23□□□□□ -1.09
VRK1-203ENST00000555067 FUCA1P04066 466 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 NTRK1P04629 796 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 SSBP05455 408 aaKnown RBP eCLIP8.22□□□□□ -1.09
VRK1-203ENST00000555067 MBLAC2Q68D91 279 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 IQCEQ6IPM2 695 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 Q8N1X5 172 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 ADAMTS17Q8TE56 1095 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 AP5M1Q9H0R1 490 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 MARCH2Q9P0N8 246 aa8.22□□□□□ -1.09
VRK1-203ENST00000555067 SMAD7O15105 426 aaKnown RBP8.21□□□□□ -1.1
VRK1-203ENST00000555067 C6P13671 934 aa8.21□□□□□ -1.1
VRK1-203ENST00000555067 HMGA2P52926 109 aa8.21□□□□□ -1.1
VRK1-203ENST00000555067 E4F1Q66K89 784 aaPredicted RBP8.21□□□□□ -1.1
VRK1-203ENST00000555067 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
VRK1-203ENST00000555067 PLEKHO2Q8TD55 490 aa8.21□□□□□ -1.1
VRK1-203ENST00000555067 SLPIP03973 132 aa8.2□□□□□ -1.1
VRK1-203ENST00000555067 ERCC5P28715 1186 aaPredicted RBP8.2□□□□□ -1.1
VRK1-203ENST00000555067 GNL2Q13823 731 aaKnown RBP8.2□□□□□ -1.1
VRK1-203ENST00000555067 C6orf15Q6UXA7 325 aaPredicted RBP8.2□□□□□ -1.1
VRK1-203ENST00000555067 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
VRK1-203ENST00000555067 NPLOC4Q8TAT6 608 aa8.2□□□□□ -1.1
VRK1-203ENST00000555067 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
VRK1-203ENST00000555067 PCDH18Q9HCL0 1135 aa8.2□□□□□ -1.1
VRK1-203ENST00000555067 CYP2C8P10632 490 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 TACR2P21452 398 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 ACVRL1P37023 503 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 GTF2A2P52657 109 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 FAM178BQ8IXR5 827 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 FRS2Q8WU20 508 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 SEC14L1Q92503 715 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 DPF3Q92784 378 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 ZBTB8AQ96BR9 441 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
VRK1-203ENST00000555067 HOXC12P31275 282 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 SLC6A11P48066 632 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 RPL11P62913 178 aaKnown RBP8.18□□□□□ -1.1
VRK1-203ENST00000555067 KCNAB2Q13303 367 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 INF2Q27J81 1249 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 LARP1BQ659C4 914 aaKnown RBP8.18□□□□□ -1.1
VRK1-203ENST00000555067 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 ZNF227Q86WZ6 799 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 BTN2A2Q8WVV5 523 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 MENTQ9BUN1 341 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 LRP2BPQ9P2M1 347 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 PRKAG3Q9UGI9 489 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
VRK1-203ENST00000555067 C22orf46C9J442 243 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 CYR61O00622 381 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 SUSD5O60279 629 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 GDF5P43026 501 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 CDSNQ15517 529 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 SV2CQ496J9 727 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 CRIP3Q6Q6R5 217 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 MIB1Q86YT6 1006 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 Q8N1Y9 231 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
VRK1-203ENST00000555067 TIMM13Q9Y5L4 95 aaPredicted RBP8.17□□□□□ -1.1
VRK1-203ENST00000555067 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
VRK1-203ENST00000555067 MYO1BO43795 1136 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 CPP00450 1065 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 SCG5P05408 212 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 SNRPB2P08579 225 aaKnown RBP8.16□□□□□ -1.1
VRK1-203ENST00000555067 FXNQ16595 210 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 ACBD5Q5T8D3 534 aaPredicted RBP8.16□□□□□ -1.1
VRK1-203ENST00000555067 SPRED1Q7Z699 444 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 DIO2Q92813 273 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 CCDC140Q96MF4 163 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 MRIQ9BWK5 157 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 LGR4Q9BXB1 951 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 INVSQ9Y283 1065 aa8.16□□□□□ -1.1
VRK1-203ENST00000555067 SGSM2O43147 1006 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 SMARCA5O60264 1052 aaPredicted RBP8.15□□□□□ -1.1
VRK1-203ENST00000555067 DDAH1O94760 285 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 ITGAVP06756 1048 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 C8BP07358 591 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 TESK1Q15569 626 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 RGL3Q3MIN7 710 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 ZC3H18Q86VM9 953 aaKnown RBP8.15□□□□□ -1.1
VRK1-203ENST00000555067 LGI4Q8N135 537 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 CHST13Q8NET6 341 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms