RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
SRP54-205ENST00000554803 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 FAM86C2PA6NEL3 165 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 SMIM22K7EJ46 135 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 TPM1P09493 284 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 RARBP10826 455 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 NCBP1Q09161 790 aaKnown RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 ALX1Q15699 326 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
SRP54-205ENST00000554803 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
SRP54-205ENST00000554803 ZNF213O14771 459 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 PRC1O43663 620 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 TLL1O43897 1013 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 COBLO75128 1261 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 GNAT2P19087 354 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 VCAM1P19320 739 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
SRP54-205ENST00000554803 HAND2P61296 217 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 MICALL1Q8N3F8 863 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 C16orf45Q96MC5 204 aaPredicted RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 MOV10L1Q9BXT6 1211 aaKnown RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 ORC3Q9UBD5 711 aaPredicted RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 NRBP1Q9UHY1 535 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 DACH1Q9UI36 760 aa12.61□□□□□ -0.39
SRP54-205ENST00000554803 YBX2Q9Y2T7 364 aaKnown RBP12.61□□□□□ -0.39
SRP54-205ENST00000554803 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 GOLGA8BA8MQT2 603 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 PGK1P00558 417 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CYP2D6P10635 497 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CSF2RAP15509 400 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 USP5P45974 858 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 TDO2P48775 406 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 USP14P54578 494 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CCZ1BP86790 482 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CCZ1P86791 482 aaPredicted RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 SKIV2LQ15477 1246 aaKnown RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 SHCBP1Q8NEM2 672 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 TSEN34Q9BSV6 310 aaKnown RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 NAPBQ9H115 298 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 GOLPH3LQ9H4A5 285 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 CNNM2Q9H8M5 875 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 STARD7Q9NQZ5 370 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 SAP30BPQ9UHR5 308 aaKnown RBP12.6□□□□□ -0.39
SRP54-205ENST00000554803 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 COG5Q9UP83 839 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 FLT1P17948 1338 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 MCM3APO60318 1980 aa12.6□□□□□ -0.39
SRP54-205ENST00000554803 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 CUTAO60888 179 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 GH2P01242 217 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 ACRP10323 421 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
SRP54-205ENST00000554803 POU3F3P20264 500 aaPredicted RBP12.59□□□□□ -0.39
SRP54-205ENST00000554803 TUBB4BP68371 445 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 LRMPQ12912 555 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 TRIM29Q14134 588 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 KANK3Q6NY19 840 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
SRP54-205ENST00000554803 PRR33A8MZF0 331 aa12.58□□□□□ -0.4
SRP54-205ENST00000554803 ZSCAN12O43309 604 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms